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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF4099 and GFF4100 are separated by 4 nucleotides
GFF4100 and GFF4101 are separated by 40 nucleotides
GFF4101 and GFF4102 are separated by 119 nucleotides
GFF4102 and GFF4103 are separated by 311 nucleotides
GFF4099 - cytosolic long-chain acyl-CoA thioester hydrolase family protein, at 4,118,324 to 4,118,704
GFF4099
GFF4100 - hypothetical protein, at 4,118,709 to 4,120,232
GFF4100
GFF4101 - hypothetical protein, at 4,120,273 to 4,121,676
GFF4101
GFF4102 - Eukaryotic translation initiation factor 3 subunit 10, at 4,121,796 to 4,122,563
GFF4102
GFF4103 - Peptide chain release factor N(5)-glutamine methyltransferase (EC 2.1.1.297), at 4,122,875 to 4,123,696
GFF4103
Group
Condition
GFF4099
GFF4100
GFF4101
GFF4102
GFF4103
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.2
-0.1
+0.2
-0.4
-2.6
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.3
+0.0
-0.0
-0.0
-2.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
-0.1
-0.2
+0.2
-1.5
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
+0.1
+0.1
+0.3
-1.9
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-0.1
-0.0
+0.1
-1.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
-0.1
+0.0
+0.4
-1.5
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
+0.1
+0.1
+0.1
-1.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
+0.1
-0.0
+0.1
-0.9
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.5
+0.1
-0.0
+0.4
-1.7
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
-0.0
+0.1
+0.2
-0.9
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.2
+0.1
+0.1
+0.4
-1.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
+0.1
+0.1
+0.2
-0.9
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
+0.0
-0.0
+0.3
-0.5
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.2
-0.0
+0.1
-0.1
-0.4
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
+0.1
-0.0
+0.1
-0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
+0.1
+0.1
+0.4
-0.7
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.3
+0.1
-0.0
+0.4
-0.6
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.2
+0.0
+0.1
-0.0
+0.4
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