Fitness for 3 genes in Variovorax sp. SCN45

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500 ntGFF4100 and GFF4101 are separated by 37 nucleotidesGFF4101 and GFF4102 overlap by 4 nucleotides GFF4100 - ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines), at 234 to 1,835 GFF4100 GFF4101 - N-methylhydantoinase B (EC 3.5.2.14), at 1,873 to 3,609 GFF4101 GFF4102 - N-methylhydantoinase B (EC 3.5.2.14), at 3,606 to 5,306 GFF4102
Group Condition GFF4100 GFF4101 GFF4102
complex community Community=arabino-guar; Passage=4 +0.3 -0.5 -1.2
complex community Community=guar; Passage=4 -0.1 -0.5 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.2 -0.1 -0.6
complex community Community=arabino-guar; Passage=4 -0.2 -0.6 -0.1
complex community Community=arabino-guar; Passage=4 -0.1 -0.0 -0.7
complex community Community=Kojac gum; Passage=1 -0.4 -0.2 -0.2
complex community Community=guar; Passage=4 -0.3 +0.2 -0.4
vitamin M9 with Supernatant from Cyptococcus -0.1 -0.0 -0.3
complex community Community=Locust bean gum; Passage=4 +0.4 -0.5 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 +0.0 -0.4
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.0 -0.5 +0.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.1 -0.2 +0.1
phage phage_bap4 -0.0 -0.3 +0.3
no phage control no phage control -0.2 -0.0 +0.2
complex community Community=Locust bean gum; Passage=4 +0.5 +0.0 -0.5
vitamin M9 with calcium pantothenate 10 mg/mL +0.4 -0.4 -0.0
complex community Community=guar; Passage=4 -0.1 -0.2 +0.5
no phage control no phage control +0.1 +0.2 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 -0.0 +0.5
vitamin M9 with calcium pantothenate 10 mg/mL -0.2 +0.4 +0.1
phage phage_bap4 -0.0 +0.2 +0.2
phage phage_bap4 -0.2 +0.2 +0.4
phage phage_bap4 -0.2 +0.1 +0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.0 -0.0 +0.4
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.3 -0.0 +0.2
vitamin M9 with Supernatant from Cyptococcus +0.0 +0.1 +0.4
complex community Community=Locust bean gum; Passage=4 +0.2 -0.1 +0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.1 +0.3 +0.4
complex community Community=guar; Passage=4 +0.2 +0.4 +0.3
complex community Community=Kojac gum; Passage=4 +0.5 -0.1 +0.5
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