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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Hydrogenophaga sp. GW460-11-11-14-LB1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF4090 and GFF4091 overlap by 4 nucleotides
GFF4091 and GFF4092 overlap by 4 nucleotides
GFF4092 and GFF4093 are separated by 6 nucleotides
GFF4093 and GFF4094 are separated by 5 nucleotides
GFF4090 - Flagellar biosynthesis protein FliQ, at 1,003,428 to 1,003,697
GFF4090
GFF4091 - Flagellar biosynthesis protein FliP, at 1,003,694 to 1,004,488
GFF4091
GFF4092 - Flagellar motor switch protein FliN, at 1,004,485 to 1,004,865
GFF4092
GFF4093 - hypothetical protein, at 1,004,872 to 1,005,753
GFF4093
GFF4094 - Flagellar hook-basal body complex protein FliE, at 1,005,759 to 1,006,070
GFF4094
Group
Condition
GFF4090
GFF4091
GFF4092
GFF4093
GFF4094
carbon source
Ying_sugar7 rep A; time point 3
-0.7
-0.4
-0.4
N.D.
N.D.
carbon source
Ying_all64 rep C; time point 3
-0.2
-0.5
-0.7
N.D.
N.D.
carbon source
Ying_all64 rep C; time point 2
-1.1
-0.0
+0.0
N.D.
N.D.
carbon source
Ying_Others16 rep A; time point 2
-0.3
+0.0
-0.7
N.D.
N.D.
carbon source
Ying_sugar7 rep A; time point 2
-0.5
-0.6
+0.2
N.D.
N.D.
carbon source
Ying_Others16 rep B; time point 1
-0.5
-0.0
-0.4
N.D.
N.D.
carbon source
Ying_AminoAcid20 rep A; time point 2
-0.5
+0.0
-0.4
N.D.
N.D.
carbon source
Ying_sugar7 rep C; time point 3
-0.0
-0.2
-0.7
N.D.
N.D.
carbon source
Ying_all64 rep A; time point 3
-0.7
+0.1
-0.1
N.D.
N.D.
carbon source
Ying_Others16 rep B; time point 3
-0.6
+0.2
-0.3
N.D.
N.D.
carbon source
Ying_OrganicAcid7 rep A; time point 3
+0.2
-0.4
-0.5
N.D.
N.D.
carbon source
Ying_OrganicAcid7 rep B; time point 3
+0.0
-0.2
-0.4
N.D.
N.D.
carbon source
Ying_all64 rep B; time point 1
-0.8
+0.3
-0.1
N.D.
N.D.
carbon source
Ying_sugar7 rep C; time point 1
-0.1
-0.1
-0.4
N.D.
N.D.
carbon source
Ying_sugar7 rep C; time point 2
+0.1
-0.2
-0.3
N.D.
N.D.
carbon source
Ying_sugar7 rep A; time point 1
-0.3
+0.1
-0.3
N.D.
N.D.
carbon source
Ying_OrganicAcid7 rep C; time point 3
+0.1
+0.2
-0.8
N.D.
N.D.
carbon source
Ying_OrganicAcid7 rep B; time point 1
+0.2
-0.3
-0.2
N.D.
N.D.
carbon source
Ying_Nucleobase14 rep B; time point 1
-0.4
+0.3
-0.2
N.D.
N.D.
carbon source
Ying_all64 rep A; time point 1
-0.3
+0.2
-0.3
N.D.
N.D.
carbon source
Ying_OrganicAcid7 rep C; time point 1
+0.1
-0.0
-0.4
N.D.
N.D.
carbon source
Ying_Nucleobase14 rep A; time point 2
+0.5
-0.3
-0.4
N.D.
N.D.
carbon source
Ying_Others16 rep A; time point 1
-0.5
+0.4
-0.2
N.D.
N.D.
carbon source
Ying_OrganicAcid7 rep B; time point 2
-0.1
+0.2
-0.2
N.D.
N.D.
carbon source
Ying_all64 rep B; time point 3
-0.0
+0.4
-0.5
N.D.
N.D.
carbon source
Ying_AminoAcid20 rep A; time point 3
+0.2
+0.1
-0.4
N.D.
N.D.
carbon source
Ying_Others16 rep A; time point 3
+0.3
+0.1
-0.3
N.D.
N.D.
carbon source
Ying_all64 rep C; time point 1
-0.1
+0.2
+0.3
N.D.
N.D.
carbon source
Ying_Nucleobase14 rep C; time point 1
+0.4
+0.3
-0.4
N.D.
N.D.
carbon source
Ying_AminoAcid20 rep C; time point 3
+0.2
+0.3
-0.1
N.D.
N.D.
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