Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF407 and GFF408 are separated by 53 nucleotidesGFF408 and GFF409 are separated by 74 nucleotidesGFF409 and GFF410 are separated by 14 nucleotidesGFF410 and GFF411 overlap by 4 nucleotides GFF407 - no description, at 441,801 to 442,283 GFF407 GFF408 - Two-component system response regulator OmpR, at 442,337 to 443,068 GFF408 GFF409 - Osmolarity sensory histidine kinase EnvZ, at 443,143 to 444,564 GFF409 GFF410 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12), at 444,579 to 445,067 GFF410 GFF411 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60), at 445,064 to 445,786 GFF411
Group Condition GFF407 GFF408 GFF409 GFF410 GFF411
phage phage_bap4 +0.3 -4.1 -2.9 N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.1 -3.6 -2.6 N.D. N.D.
vitamin M9 with Supernatant from Cyptococcus +0.1 -3.5 -2.5 N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 -3.7 -2.2 N.D. N.D.
complex community Community=guar; Passage=4 -0.2 -2.9 -2.7 N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL -0.2 -3.6 -2.0 N.D. N.D.
complex community Community=arabino-guar; Passage=4 -0.3 -2.7 -2.6 N.D. N.D.
phage phage_bap4 +0.2 -2.5 -3.2 N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL +0.2 -3.5 -2.2 N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 -3.6 -2.0 N.D. N.D.
complex community Community=guar; Passage=4 -0.4 -2.6 -2.5 N.D. N.D.
complex community Community=guar; Passage=4 -0.3 -2.6 -2.5 N.D. N.D.
complex community Community=arabino-guar; Passage=4 -0.0 -2.8 -2.6 N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 -2.9 -2.5 N.D. N.D.
complex community Community=Kojac gum; Passage=4 -0.3 -2.6 -2.5 N.D. N.D.
vitamin M9 with Supernatant from Cyptococcus -0.1 -2.8 -2.5 N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.0 -3.7 -1.6 N.D. N.D.
complex community Community=guar; Passage=4 +0.2 -2.9 -2.7 N.D. N.D.
complex community Community=Locust bean gum; Passage=4 -0.1 -2.7 -2.4 N.D. N.D.
complex community Community=arabino-guar; Passage=4 +0.6 -3.0 -2.8 N.D. N.D.
vitamin M9 with Supernatant from Cyptococcus -0.4 -2.0 -2.7 N.D. N.D.
complex community Community=arabino-guar; Passage=4 +0.0 -2.7 -2.5 N.D. N.D.
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.3 -3.3 -2.1 N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 -3.5 -1.5 N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL +0.0 -2.0 -3.1 N.D. N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.3 -2.6 -2.1 N.D. N.D.
complex community Community=Locust bean gum; Passage=4 -0.3 -2.5 -2.3 N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.2 -2.8 -2.3 N.D. N.D.
phage phage_bap4 +0.0 -2.1 -2.9 N.D. N.D.
complex community Community=Locust bean gum; Passage=4 +0.3 -2.6 -2.4 N.D. N.D.
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