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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF4081 and GFF4082 are separated by 39 nucleotides
GFF4082 and GFF4083 are separated by 99 nucleotides
GFF4083 and GFF4084 are separated by 53 nucleotides
GFF4084 and GFF4085 are separated by 19 nucleotides
GFF4081 - Nodulin-related protein CC_0717, at 4,093,291 to 4,094,004
GFF4081
GFF4082 - Glutathione peroxidase (EC 1.11.1.9) @ Thioredoxin peroxidase (EC 1.11.1.15), at 4,094,044 to 4,094,589
GFF4082
GFF4083 - FIG01094649: hypothetical protein, at 4,094,689 to 4,096,005
GFF4083
GFF4084 - UPF0126 inner membrane protein CC_3680, at 4,096,059 to 4,096,703
GFF4084
GFF4085 - Aminobenzoyl-glutamate utilization protein B, at 4,096,723 to 4,098,171
GFF4085
Group
Condition
GFF4081
GFF4082
GFF4083
GFF4084
GFF4085
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.6
-0.2
-0.3
-0.2
-0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
+0.1
-0.7
-0.3
-0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.3
-0.0
-0.4
+0.1
-0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
-0.3
-0.0
-0.0
-0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.2
-0.1
+0.0
-0.0
-0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
-0.3
-0.0
+0.0
-0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.2
-0.1
-0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.4
-0.4
-0.1
-0.2
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
+0.1
+0.1
-0.3
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
+0.2
-0.1
-0.1
-0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.2
-0.1
-0.1
-0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.3
+0.2
-0.2
-0.1
-0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.3
-0.1
-0.2
+0.0
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
+0.1
-0.0
+0.1
-0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
+0.0
-0.0
+0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.2
+0.1
-0.1
+0.0
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.2
+0.2
+0.0
-0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.5
+0.2
+0.0
+0.0
+0.0
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