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Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF4076 and GFF4077 are separated by 48 nucleotides
GFF4077 and GFF4078 are separated by 70 nucleotides
GFF4078 and GFF4079 are separated by 4 nucleotides
GFF4079 and GFF4080 are separated by 140 nucleotides
GFF4076 - Two-component transcriptional response regulator, LuxR family, at 4,087,958 to 4,088,623
GFF4076
GFF4077 - hypothetical protein, at 4,088,672 to 4,089,010
GFF4077
GFF4078 - FIG00637150: hypothetical protein, at 4,089,081 to 4,090,574
GFF4078
GFF4079 - Protein of unknown function DUF541, at 4,090,579 to 4,091,304
GFF4079
GFF4080 - Bis-ABC ATPase Uup, at 4,091,445 to 4,093,223
GFF4080
Group
Condition
GFF4076
GFF4077
GFF4078
GFF4079
GFF4080
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-2.4
N.D.
-0.0
-0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-2.3
N.D.
-0.0
-0.0
+0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-2.2
N.D.
-0.0
+0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-1.5
N.D.
-0.2
-0.3
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-2.2
N.D.
+0.0
-0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-2.3
N.D.
-0.0
-0.0
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-1.6
N.D.
-0.1
-0.0
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-1.2
N.D.
-0.3
-0.2
-0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-1.7
N.D.
-0.1
-0.1
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-1.7
N.D.
-0.0
-0.1
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-2.0
N.D.
-0.0
+0.0
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-1.7
N.D.
-0.0
-0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-1.7
N.D.
-0.1
-0.0
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-2.0
N.D.
+0.0
+0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-1.9
N.D.
+0.0
-0.0
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-1.7
N.D.
+0.0
-0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-1.2
N.D.
-0.2
-0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-1.1
N.D.
-0.1
-0.0
+0.1
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