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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 16 experiments (either direction), sorted by average fitness
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500 nt
GFF4074 and GFF4075 are separated by 98 nucleotides
GFF4075 and GFF4076 are separated by 115 nucleotides
GFF4076 and GFF4077 are separated by 48 nucleotides
GFF4077 and GFF4078 are separated by 70 nucleotides
GFF4074 - Similar to hypothetical protein DUF454, at 4,086,032 to 4,086,385
GFF4074
GFF4075 - Two-component system sensor histidine kinase, at 4,086,484 to 4,087,842
GFF4075
GFF4076 - Two-component transcriptional response regulator, LuxR family, at 4,087,958 to 4,088,623
GFF4076
GFF4077 - hypothetical protein, at 4,088,672 to 4,089,010
GFF4077
GFF4078 - FIG00637150: hypothetical protein, at 4,089,081 to 4,090,574
GFF4078
Group
Condition
GFF4074
GFF4075
GFF4076
GFF4077
GFF4078
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.4
-1.5
-1.7
N.D.
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-1.2
-1.2
-1.5
N.D.
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
-1.0
-2.3
N.D.
+0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.7
-0.9
-1.5
N.D.
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.4
-1.0
-1.5
N.D.
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.3
-1.1
-1.5
N.D.
-0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
-0.7
-2.0
N.D.
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.0
-1.0
-1.8
N.D.
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
-1.1
-1.5
N.D.
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-1.0
-1.5
N.D.
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
-0.9
-1.6
N.D.
-0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
-1.0
-1.2
N.D.
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.2
-0.8
-1.1
N.D.
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.4
-1.1
-1.4
N.D.
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.2
-0.6
-1.7
N.D.
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.4
-1.0
-0.9
N.D.
-0.1
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