Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

Or view all 552 experiments or choose conditions or try the comparative fitness browser

Group	Condition	PS417_20840	PS417_20845	PS417_20850	PS417_20855	PS417_20860
stress	Gentamicin 0.008 mg/ml	-0.4	+0.1	-1.5	-3.3	-0.8
soil	soil sample 8; outgrowth in LB	-0.6	-0.2	-0.5	-3.6	-0.7
motility	outer cut, LB soft agar motility assay	-0.0	+0.0	-1.8	-2.7	-0.3
motility	outer cut, LB soft agar motility assay	+0.0	+0.0	-1.6	-3.3	+0.1
soil	soil sample 6; outgrowth in LB	-0.5	-0.1	-0.4	-3.5	-0.2
motility	outer cut, LB soft agar motility assay	-0.1	-0.5	-1.1	-3.1	+0.3
motility	inner cut, LB soft agar motility assay	-0.2	-0.5	-0.7	-2.8	-0.2
liquid stress	80% Methanol 3 mM; liquid stress	-0.4	+0.1	-0.3	-3.7	-0.1
soil	soil sample 2; outgrowth in LB	-0.7	-0.2	-0.7	-2.4	-0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.5	-0.5	-0.7	-3.7	+0.2
liquid stress	80% Methanol 3 mM; liquid stress	-0.4	-0.4	+0.0	-3.1	-0.2
stress	R2A with Fusaric 120 ug/mL	+0.1	-0.1	-0.1	-3.4	-0.4
phage	P. simiae OR1 MOI 0.1	+0.1	-0.6	-0.3	-2.3	-0.6
liquid stress	Scopoletin 3 mM; liquid stress	+0.0	+0.0	-0.3	-3.3	-0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.8	-0.4	-0.3	-3.8	+0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.7	-0.2	-0.6	-3.6	+0.1
motility	inner cut, LB soft agar motility assay	-0.2	-0.2	-0.9	-2.3	+0.0
motility	outer cut, LB soft agar motility assay	-0.1	-0.0	-1.2	-1.9	-0.2
liquid stress	80% Methanol 2 mM; liquid stress	-0.1	+0.2	-0.0	-3.5	+0.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.5	-0.1	-0.2	-3.6	+0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.1	+0.1	-0.2	-3.6	+0.6
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.1	+0.5	+0.0	-2.8	-0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.5	+0.3	+0.1	-2.2	-0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.7	+0.2	-0.1	-2.2	+0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.5	+0.1	-0.3	-2.7	+0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+1.3	-0.5	-0.2	-2.9	+0.4
phage	Wcs_0.1	+0.4	+0.3	+0.4	-2.6	-0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Threonine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+1.2	+0.0	-0.2	-2.9	+0.2
phage	JP1 MOI 10	+0.5	+0.2	+0.4	-2.7	+0.3
soil	soil sample 5; outgrowth in LB	-0.4	-0.4	-0.7	+1.7	-0.2