Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_20835	PS417_20840	PS417_20845	PS417_20850	PS417_20855
motility	outer cut, LB soft agar motility assay	-0.5	-0.0	+0.0	-1.8	-2.7
soil	soil sample 8; outgrowth in LB	-0.0	-0.6	-0.2	-0.5	-3.6
motility	outer cut, LB soft agar motility assay	-0.1	+0.0	+0.0	-1.6	-3.3
motility	outer cut, LB soft agar motility assay	+0.0	-0.1	-0.5	-1.1	-3.1
stress	Gentamicin 0.008 mg/ml	+0.6	-0.4	+0.1	-1.5	-3.3
liquid stress	80% Methanol 3 mM; liquid stress	-0.3	-0.4	+0.1	-0.3	-3.7
soil	soil sample 6; outgrowth in LB	+0.0	-0.5	-0.1	-0.4	-3.5
motility	inner cut, LB soft agar motility assay	-0.1	-0.2	-0.5	-0.7	-2.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.6	+0.1	+0.1	-0.2	-3.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.3	+0.5	-0.5	-0.7	-3.7
liquid stress	80% Methanol 3 mM; liquid stress	-0.1	-0.4	-0.4	+0.0	-3.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.6	+0.5	-0.1	-0.2	-3.6
soil	soil sample 2; outgrowth in LB	+0.1	-0.7	-0.2	-0.7	-2.4
liquid stress	Scopoletin 3 mM; liquid stress	-0.3	+0.0	+0.0	-0.3	-3.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.2	+0.8	-0.4	-0.3	-3.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.1	+0.7	-0.2	-0.6	-3.6
motility	inner cut, LB soft agar motility assay	-0.2	-0.2	-0.2	-0.9	-2.3
liquid stress	80% Methanol 2 mM; liquid stress	-0.1	-0.1	+0.2	-0.0	-3.5
stress	R2A with Fusaric 120 ug/mL	+0.0	+0.1	-0.1	-0.1	-3.4
motility	outer cut, LB soft agar motility assay	-0.1	-0.1	-0.0	-1.2	-1.9
phage	P. simiae OR1 MOI 0.1	+0.3	+0.1	-0.6	-0.3	-2.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.2	-0.5	+0.3	+0.1	-2.2
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.1	-0.1	+0.5	+0.0	-2.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.1	+0.5	+0.1	-0.3	-2.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.8	+0.4	+0.0	-0.4	-1.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.0	+1.3	-0.5	-0.2	-2.9
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Threonine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.2	+1.2	+0.0	-0.2	-2.9
phage	JP1 MOI 10	+0.2	+0.5	+0.2	+0.4	-2.7
phage	Wcs_0.1	+0.2	+0.4	+0.3	+0.4	-2.6
stress	methylglyoxal 0.032 vol%	-0.5	-0.2	+0.0	+0.5	+2.1