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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF4065 and GFF4066 overlap by 4 nucleotides
GFF4066 and GFF4067 are separated by 43 nucleotides
GFF4067 and GFF4068 are separated by 120 nucleotides
GFF4068 and GFF4069 are separated by 94 nucleotides
GFF4065 - hypothetical protein, at 4,079,172 to 4,079,681
GFF4065
GFF4066 - Nitronate monooxygenase (EC 1.13.12.16), at 4,079,678 to 4,080,727
GFF4066
GFF4067 - COG0441: Threonyl-tRNA synthetase, at 4,080,771 to 4,081,073
GFF4067
GFF4068 - Glutamine synthetase type I (EC 6.3.1.2), at 4,081,194 to 4,082,606
GFF4068
GFF4069 - Nitrogen regulatory protein P-II, at 4,082,701 to 4,083,039
GFF4069
Group
Condition
GFF4065
GFF4066
GFF4067
GFF4068
GFF4069
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.3
+0.0
-0.4
N.D.
-0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.0
-0.2
+0.1
N.D.
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.5
-0.1
-0.1
N.D.
+0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.4
-0.1
-0.3
N.D.
+0.7
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.3
-0.3
+0.5
N.D.
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
-0.0
+0.0
N.D.
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.4
-0.0
-0.1
N.D.
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
-0.0
-0.1
N.D.
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
-0.1
+0.1
N.D.
+0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.1
-0.3
N.D.
+0.5
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.2
-0.1
-0.0
N.D.
+0.6
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.2
+0.0
-0.2
N.D.
+0.8
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.2
+0.1
-0.0
N.D.
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
-0.1
-0.9
N.D.
+1.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.1
-0.0
N.D.
+0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
+0.1
+0.0
N.D.
+0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
-0.1
+0.3
N.D.
+0.9
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.3
-0.1
+0.0
N.D.
+0.9
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