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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF4064 and GFF4065 are separated by 138 nucleotides
GFF4065 and GFF4066 are separated by 78 nucleotides
GFF4066 and GFF4067 are separated by 186 nucleotides
GFF4067 and GFF4068 are separated by 44 nucleotides
GFF4064 - no description, at 279,002 to 279,340
GFF4064
GFF4065 - Uncharacterized cysteine-rich DUF326 protein bsYhjQ/STM1261, at 279,479 to 279,808
GFF4065
GFF4066 - Putative type II restriction enzyme NmeDIP (EC 3.1.21.4) (Endonuclease NmeDIP) (R.NmeDIP), at 279,887 to 281,173
GFF4066
GFF4067 - FIG00897050: hypothetical protein, at 281,360 to 283,003
GFF4067
GFF4068 - Heavy metal sensor histidine kinase, at 283,048 to 284,445
GFF4068
Group
Condition
GFF4064
GFF4065
GFF4066
GFF4067
GFF4068
complex community
Community=arabino-guar; Passage=4
-3.3
-0.7
+0.3
+0.1
-0.3
complex community
Community=guar; Passage=4
-1.9
+0.5
-0.6
+0.2
-0.3
complex community
Community=guar; Passage=4
-0.9
-0.3
+0.3
+0.3
-0.4
complex community
Community=arabino-guar; Passage=4
-0.0
-1.1
+0.1
+0.3
-0.2
complex community
Community=Kojac gum; Passage=4
-0.4
-0.1
-0.5
+0.3
-0.1
complex community
Community=Locust bean gum; Passage=4
-1.9
-0.3
+0.7
+0.2
+0.5
complex community
Community=Locust bean gum; Passage=4
-1.9
+0.3
+0.3
+0.4
+0.3
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-0.3
-0.2
+0.3
-0.0
-0.3
complex community
Community=guar; Passage=4
-0.7
-0.0
-0.0
+0.2
-0.0
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-0.2
-0.3
+0.3
+0.0
-0.3
vitamin
M9 with Supernatant from Cyptococcus
-0.6
+0.2
+0.1
+0.1
-0.3
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-0.2
+0.2
+0.1
-0.1
-0.4
complex community
Community=guar; Passage=4
-0.7
-0.0
+0.0
+0.0
+0.3
vitamin
M9 with Supernatant from Cyptococcus
-0.5
-0.3
+0.5
+0.0
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.1
-0.4
+0.3
+0.1
-0.3
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.1
-0.3
+0.3
-0.0
-0.3
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.2
-0.3
+0.3
-0.0
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.3
-0.4
+0.5
+0.1
-0.1
complex community
Community=arabino-guar; Passage=4
-0.5
-0.4
+0.2
+0.1
+0.5
complex community
Community=Locust bean gum; Passage=4
-0.9
+0.2
+0.5
+0.1
+0.3
complex community
Community=Locust bean gum; Passage=4
+0.3
-1.0
+0.4
+0.0
+0.7
vitamin
M9 with Supernatant from Cyptococcus
+0.5
-0.3
+0.4
-0.0
-0.2
phage
phage_bap4
-0.2
-0.0
+0.4
+0.2
+0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.3
+0.1
+0.3
+0.0
-0.2
complex community
Community=arabino-guar; Passage=4
-0.4
+0.1
+0.4
+0.1
+0.5
complex community
Community=Kojac gum; Passage=1
+0.6
-0.1
+0.3
+0.1
+0.0
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
+0.2
+0.4
+0.4
+0.1
-0.0
phage
phage_bap4
+0.1
+0.1
+0.4
+0.2
+0.5
phage
phage_bap4
+0.1
+0.3
+0.3
+0.3
+0.4
vitamin
M9 with Supernatant from Cyptococcus
+0.9
+0.4
+0.3
+0.0
-0.2
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