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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF4060 and GFF4061 are separated by 57 nucleotides
GFF4061 and GFF4062 are separated by 78 nucleotides
GFF4062 and GFF4063 are separated by 17 nucleotides
GFF4063 and GFF4064 are separated by 91 nucleotides
GFF4060 - GCN5-related N-acetyltransferase, at 4,075,505 to 4,075,990
GFF4060
GFF4061 - RNA polymerase sigma factor RpoH, at 4,076,048 to 4,076,962
GFF4061
GFF4062 - LSU rRNA pseudouridine(1911/1915/1917) synthase (EC 5.4.99.23), at 4,077,041 to 4,077,991
GFF4062
GFF4063 - Mov34/MPN/PAD-1 family protease, at 4,078,009 to 4,078,410
GFF4063
GFF4064 - FIG00636652: hypothetical protein, at 4,078,502 to 4,079,155
GFF4064
Group
Condition
GFF4060
GFF4061
GFF4062
GFF4063
GFF4064
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.3
N.D.
-0.1
-0.9
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-1.1
N.D.
+0.5
-0.5
+0.5
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
N.D.
+0.4
-1.2
+0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.5
N.D.
-0.2
-0.0
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.5
N.D.
-0.4
+0.0
+0.7
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.7
N.D.
-0.1
+0.0
+0.6
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.4
N.D.
-0.1
-0.2
+0.5
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.3
N.D.
-0.3
+0.1
+0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.5
N.D.
+0.2
-0.2
+0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.3
N.D.
-0.2
-0.0
+0.4
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
N.D.
+0.3
-0.5
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.3
N.D.
+0.7
-0.8
+0.5
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.3
N.D.
+0.5
-0.3
+0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.4
N.D.
+0.6
-0.6
+0.5
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
N.D.
+0.5
-0.7
+0.4
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.4
N.D.
+0.6
-0.4
+0.5
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.2
N.D.
+0.6
-0.3
+0.5
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.2
N.D.
+0.6
-0.5
+0.2
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