Fitness for 5 genes in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

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500 ntGFF404 and GFF405 are separated by 73 nucleotidesGFF405 and GFF406 are separated by 267 nucleotidesGFF406 and GFF407 overlap by 20 nucleotidesGFF407 and GFF408 overlap by 33 nucleotides GFF404 - D-glucarate permease, at 119,043 to 120,353 GFF404 GFF405 - L-talarate dehydratase @ Galactarate dehydratase (EC 4.2.1.42), at 120,427 to 121,623 GFF405 GFF406 - Transcriptional regulator, LacI family, at 121,891 to 122,946 GFF406 GFF407 - hypothetical protein, at 122,927 to 123,046 GFF407 GFF408 - 'tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207)' transl_table=11, at 123,014 to 123,487 GFF408
Group Condition GFF404 GFF405 GFF406 GFF407 GFF408
phage 6H2_phage 10 MOI; agar plate assay -0.3 -0.1 +0.1 -0.9 -0.1
phage phi19h1_phage 15 MOI -0.4 +0.0 -0.3 -0.5 -0.0
phage LB_plus_SM_buffer with Ffm_phage 18.75 MOI -0.0 -0.0 -0.2 -0.4 -0.5
phage LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI -0.4 -0.1 -0.1 -0.2 -0.2
lb_plus_sm_buffer LB_plus_SM_buffer -0.3 -0.1 -0.2 -0.1 -0.2
phage LB_plus_SM_buffer with S16_phage 15 MOI +0.0 -0.2 -0.1 -0.5 -0.2
phage LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI -0.3 -0.2 -0.3 -0.3 +0.2
phage LB_plus_SM_buffer with 6C2_phage 15 MOI -0.0 -0.1 -0.2 -0.5 +0.0
phage phi19h1_phage 15 MOI +0.0 +0.1 -0.1 -0.6 -0.1
phage LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI +0.3 -0.2 -0.4 -0.3 -0.1
phage LB_plus_SM_buffer with 6F2_phage 15 MOI +0.1 -0.1 +0.0 -0.4 -0.2
phage LB_plus_SM_buffer with P22_phage 15 MOI -0.0 +0.3 -0.0 -0.5 -0.3
phage LB_plus_SM_buffer with phi19h1_phage 0.001875 MOI +0.2 -0.3 -0.2 -0.2 -0.1
phage LB_plus_SM_buffer with EIP30_phage 0.0000875 MOI +0.0 -0.2 -0.2 +0.1 -0.4
phage Ffm_phage 10 MOI; agar plate assay -0.4 -0.3 +0.1 -0.4 +0.7
phage LB_plus_SM_buffer with 8C2_phage 15 MOI -0.1 +0.1 -0.2 -0.5 +0.4
phage LB_plus_SM_buffer with 6D2_phage 0.75 MOI +0.1 -0.1 -0.2 -0.3 +0.3
phage LB_plus_SM_buffer with Br60_phage 0.000005 MOI -0.1 -0.1 -0.0 +0.3 -0.4
phage LB_plus_SM_buffer with 6F2_phage 0.1875 MOI -0.1 +0.1 +0.0 -0.4 +0.1
phage LB_plus_SM_buffer with ES18h1_phage 0.75 MOI -0.2 -0.1 -0.2 -0.5 +0.8
phage LB_plus_SM_buffer with FelixO1_phage 0.05 MOI -0.2 -0.0 -0.1 -0.4 +0.6
phage LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI -0.1 -0.1 -0.1 -0.1 +0.4
phage LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI -0.3 +0.0 -0.1 +0.2 +0.2
phage LB_plus_SM_buffer with Ffm_phage 0.001875 MOI -0.0 +0.0 -0.1 +0.4 -0.3
phage phi19h1_phage 15 MOI -0.1 -0.2 -0.1 +0.3 +0.1
phage 6F2_phage 15 MOI -0.1 -0.0 +0.1 -0.2 +0.4
phage LB_plus_SM_buffer with 6F2_phage 1.875 MOI +0.0 -0.1 -0.1 +0.4 +0.2
phage LB_plus_SM_buffer with Ffm_phage 0.000001875 MOI +0.2 +0.2 +0.0 +0.3 +0.1
phage LB_plus_SM_buffer with Br60_phage 0.00005 MOI +0.0 +0.1 +0.1 +0.6 +0.1
phage LB_plus_SM_buffer with Br60_phage 0.0005 MOI +0.2 -0.3 +0.4 +0.1 +2.2
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