Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF4054 and GFF4055 are separated by 89 nucleotidesGFF4055 and GFF4056 are separated by 423 nucleotidesGFF4056 and GFF4057 overlap by 4 nucleotidesGFF4057 and GFF4058 overlap by 4 nucleotides GFF4054 - no description, at 265,671 to 265,964 GFF4054 GFF4055 - hypothetical protein, at 266,054 to 266,359 GFF4055 GFF4056 - Copper/silver efflux RND transporter, transmembrane protein CusA, at 266,783 to 269,947 GFF4056 GFF4057 - Copper/silver efflux RND transporter, membrane fusion protein CusB, at 269,944 to 271,647 GFF4057 GFF4058 - Copper/silver efflux RND transporter, outer membrane protein CusC, at 271,644 to 272,999 GFF4058
Group Condition GFF4054 GFF4055 GFF4056 GFF4057 GFF4058
complex community Community=arabino-guar; Passage=4 N.D. N.D. -0.3 -0.8 -0.5
complex community Community=Kojac gum; Passage=4 N.D. N.D. -0.0 -0.7 -0.4
complex community Community=arabino-guar; Passage=4 N.D. N.D. -0.2 -0.8 -0.1
complex community Community=arabino-guar; Passage=4 N.D. N.D. +0.2 -0.7 -0.7
complex community Community=Locust bean gum; Passage=4 N.D. N.D. +0.6 -1.3 -0.4
phage phage_bap4 N.D. N.D. -0.0 -0.6 -0.1
vitamin M9 with Supernatant from Cyptococcus N.D. N.D. -0.2 -0.7 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL N.D. N.D. -0.2 -0.5 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. N.D. +0.1 -0.5 -0.1
complex community Community=Locust bean gum; Passage=4 N.D. N.D. -0.2 -0.7 +0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. N.D. -0.1 -0.4 +0.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. N.D. +0.3 -0.5 -0.0
complex community Community=guar; Passage=4 N.D. N.D. -0.6 +0.2 +0.4
phage phage_bap4 N.D. N.D. +0.7 -0.5 -0.1
complex community Community=arabino-guar; Passage=4 N.D. N.D. +0.1 -0.3 +0.4
no phage control no phage control N.D. N.D. -0.2 +0.5 -0.1
phage phage_bap4 N.D. N.D. -0.1 +0.5 -0.2
vitamin M9 with Supernatant from Cyptococcus N.D. N.D. +0.3 +0.3 -0.2
phage phage_bap4 N.D. N.D. +0.2 +0.5 -0.2
phage phage_bap4 N.D. N.D. +0.5 -0.2 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. N.D. +0.1 +0.4 +0.2
vitamin M9 with Supernatant from Cyptococcus N.D. N.D. +0.3 +0.5 -0.1
complex community Community=guar; Passage=4 N.D. N.D. +0.3 +0.2 +0.3
complex community Community=Locust bean gum; Passage=4 N.D. N.D. +0.1 +0.6 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. N.D. +0.1 +0.6 +0.3
phage phage_bap4 N.D. N.D. +0.6 +0.1 +0.4
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. N.D. +0.3 +0.3 +0.5
phage phage_bap4 N.D. N.D. +0.6 +0.6 +0.2
complex community Community=guar; Passage=4 N.D. N.D. +1.0 +1.7 -0.2
complex community Community=Locust bean gum; Passage=4 N.D. N.D. +0.5 +2.0 +0.9
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