Fitness for 5 genes in Hydrogenophaga sp. GW460-11-11-14-LB1

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500 ntGFF4049 and GFF4050 are separated by 12 nucleotidesGFF4050 and GFF4051 are separated by 10 nucleotidesGFF4051 and GFF4052 overlap by 4 nucleotidesGFF4052 and GFF4053 are separated by 0 nucleotides GFF4049 - hypothetical protein, at 968,610 to 969,227 GFF4049 GFF4050 - hypothetical protein, at 969,240 to 969,977 GFF4050 GFF4051 - hypothetical protein, at 969,988 to 970,341 GFF4051 GFF4052 - hypothetical protein, at 970,338 to 970,748 GFF4052 GFF4053 - Sensory box histidine kinase, at 970,749 to 972,344 GFF4053
Group Condition GFF4049 GFF4050 GFF4051 GFF4052 GFF4053
carbon source Ying_all64 rep C; time point 1 +0.1 -0.3 N.D. N.D. -0.8
carbon source Ying_sugar7 rep C; time point 2 -0.1 -0.2 N.D. N.D. -0.5
carbon source Ying_all64 rep A; time point 1 -0.1 +0.1 N.D. N.D. -0.6
carbon source Ying_sugar7 rep A; time point 3 -0.3 -0.1 N.D. N.D. -0.1
carbon source Ying_OrganicAcid7 rep C; time point 1 -0.2 -0.1 N.D. N.D. -0.2
carbon source Ying_AminoAcid20 rep C; time point 1 -0.0 -0.2 N.D. N.D. -0.2
carbon source Ying_AminoAcid20 rep B; time point 3 -0.2 +0.1 N.D. N.D. -0.3
carbon source Ying_sugar7 rep B; time point 3 -0.0 -0.1 N.D. N.D. -0.2
carbon source Ying_all64 rep C; time point 3 -0.3 -0.0 N.D. N.D. +0.0
carbon source Ying_sugar7 rep C; time point 1 -0.2 +0.1 N.D. N.D. -0.2
carbon source Ying_AminoAcid20 rep A; time point 2 +0.0 +0.1 N.D. N.D. -0.3
carbon source Ying_Others16 rep B; time point 1 -0.1 -0.4 N.D. N.D. +0.3
carbon source Ying_OrganicAcid7 rep A; time point 3 -0.1 +0.1 N.D. N.D. -0.2
carbon source Ying_all64 rep B; time point 3 -0.1 +0.2 N.D. N.D. -0.4
carbon source Ying_OrganicAcid7 rep A; time point 1 -0.1 +0.1 N.D. N.D. -0.2
carbon source Ying_sugar7 rep B; time point 1 -0.1 -0.2 N.D. N.D. +0.1
carbon source Ying_AminoAcid20 rep A; time point 1 -0.2 +0.1 N.D. N.D. +0.1
carbon source Ying_all64 rep B; time point 2 +0.0 +0.2 N.D. N.D. -0.2
carbon source Ying_Nucleobase14 rep A; time point 2 +0.2 -0.1 N.D. N.D. -0.1
carbon source Ying_sugar7 rep A; time point 2 +0.1 -0.3 N.D. N.D. +0.2
carbon source Ying_Nucleobase14 rep C; time point 2 +0.1 +0.1 N.D. N.D. -0.2
carbon source Ying_Nucleobase14 rep B; time point 2 -0.1 -0.2 N.D. N.D. +0.3
carbon source Ying_OrganicAcid7 rep A; time point 2 +0.1 +0.1 N.D. N.D. -0.1
carbon source Ying_Nucleobase14 rep C; time point 1 +0.2 +0.2 N.D. N.D. -0.2
carbon source Ying_sugar7 rep A; time point 1 -0.1 -0.0 N.D. N.D. +0.3
carbon source Ying_AminoAcid20 rep B; time point 1 +0.1 -0.1 N.D. N.D. +0.3
carbon source Ying_Others16 rep C; time point 2 +0.1 -0.0 N.D. N.D. +0.2
carbon source Ying_Others16 rep A; time point 3 +0.1 +0.1 N.D. N.D. +0.1
carbon source Ying_Nucleobase14 rep B; time point 1 +0.2 +0.0 N.D. N.D. +0.1
carbon source Ying_AminoAcid20 rep C; time point 2 -0.0 +0.0 N.D. N.D. +0.4
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