Fitness for 5 genes in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

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500 ntGFF4038 and GFF4039 are separated by 20 nucleotidesGFF4039 and GFF4040 are separated by 104 nucleotidesGFF4040 and GFF4041 are separated by 131 nucleotidesGFF4041 and GFF4042 are separated by 77 nucleotides GFF4038 - Methylglyoxal reductase, acetol producing (EC 1.1.1.-) / 2,5-diketo-D-gluconic acid reductase B (EC 1.1.1.274), at 479 to 1,282 GFF4038 GFF4039 - LysR family transcriptional regulator YafC, at 1,303 to 2,217 GFF4039 GFF4040 - Putative drug efflux protein, at 2,322 to 3,497 GFF4040 GFF4041 - FIG00613320: hypothetical protein, at 3,629 to 4,429 GFF4041 GFF4042 - SAM-dependent methyltransferase YafE (UbiE paralog), at 4,507 to 5,277 GFF4042
Group Condition GFF4038 GFF4039 GFF4040 GFF4041 GFF4042
phage LB_plus_SM_buffer with 6C2_phage 0.25 MOI -0.3 -0.4 -0.2 -0.4 -0.3
phage phi19h1_phage 15 MOI -0.4 -0.2 -0.3 -0.0 -0.4
phage LB_plus_SM_buffer with 6D2_phage 15 MOI -0.6 -0.7 +0.1 +0.4 -0.6
phage LB_plus_SM_buffer with 6F2_phage 0.1875 MOI -0.3 -0.5 -0.5 +0.2 -0.1
phage 6H2_phage 10 MOI; agar plate assay -0.5 -0.6 +0.4 -0.1 -0.1
phage LB_plus_SM_buffer with 6C2_phage 15 MOI -0.1 -0.2 +0.2 +0.3 -0.6
phage LB_plus_SM_buffer with S16_phage 15 MOI +0.0 +0.1 -0.4 +0.4 -0.5
phage LB_plus_SM_buffer with 6F2_phage 15 MOI -0.3 +0.1 -0.1 +0.6 -0.5
phage 6F2_phage 15 MOI -0.3 -0.4 -0.0 +0.3 +0.2
phage LB_plus_SM_buffer with 6C2_phage 15 MOI -0.3 +0.0 -0.0 +0.5 -0.4
phage LB_plus_SM_buffer with 6F2_phage 15 MOI -0.2 +0.1 -0.4 +0.7 -0.2
phage LB_plus_SM_buffer with 8C2_phage 15 MOI -0.3 +0.1 +0.3 +0.4 -0.4
phage LB_plus_SM_buffer with 6C2_phage 15 MOI -0.1 +0.3 -0.3 +0.6 -0.5
phage LB_plus_SM_buffer with 6D2_phage 15 MOI -0.1 +0.1 -0.0 +0.7 -0.5
phage LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI +0.1 +0.2 +0.1 +0.4 -0.7
phage LB_plus_SM_buffer with 6D2_phage 15 MOI -0.2 +0.1 -0.1 +0.7 -0.3
phage Ffm_phage 10 MOI; agar plate assay +0.3 -0.9 +0.3 +0.2 +0.3
phage LB_plus_SM_buffer with EIP16_phage 8.75 MOI +0.1 +0.2 -0.6 +0.4 +0.1
phage LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI -0.0 +0.2 +0.2 +0.5 -0.5
phage LB_plus_SM_buffer with 6F2_phage 15 MOI +0.0 +0.2 -0.0 +0.8 -0.5
phage LB_plus_SM_buffer with FelixO1_phage 0.5 MOI +0.3 +0.1 +0.4 +0.3 -0.6
phage LB_plus_SM_buffer with ES18h1_phage 0.75 MOI -0.1 +0.5 -0.3 +0.0 +0.4
phage 6F2_phage 15 MOI -0.2 +0.2 +0.3 +0.4 -0.0
phage LB_plus_SM_buffer with FelixO1_phage (wt new) 0.75 MOI +0.5 +0.4 -0.2 +0.5 -0.5
phage LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI +0.1 +0.4 +0.4 +0.4 -0.5
phage LB_plus_SM_buffer with P22_phage 15 MOI +0.2 +0.5 +0.3 +0.2 -0.4
phage LB_plus_SM_buffer with FelixO1_phage (wt new) 0.075 MOI +0.2 +0.1 +0.2 +0.5 -0.2
phage LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI +0.1 +0.4 +0.4 +0.3 -0.2
phage LB_plus_SM_buffer with 8C2_phage 15 MOI +0.2 +0.6 +0.3 +0.7 -0.6
phage LB_plus_SM_buffer with Br60_phage 0.0005 MOI -0.1 +2.7 -0.2 -0.4 +0.1
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