Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF4037 and GFF4038 are separated by 17 nucleotidesGFF4038 and GFF4039 overlap by 4 nucleotidesGFF4039 and GFF4040 are separated by 15 nucleotidesGFF4040 and GFF4041 are separated by 749 nucleotides GFF4037 - CzcABC family efflux RND transporter, transmembrane protein, at 244,591 to 247,716 GFF4037 GFF4038 - Cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family, at 247,734 to 248,951 GFF4038 GFF4039 - Heavy metal RND efflux outer membrane protein, CzcC family, at 248,948 to 250,267 GFF4039 GFF4040 - no description, at 250,283 to 250,414 GFF4040 GFF4041 - Lipid A phosphoethanolamine transferase, putative, at 251,164 to 252,579 GFF4041
Group Condition GFF4037 GFF4038 GFF4039 GFF4040 GFF4041
complex community Community=guar; Passage=4 +0.1 -0.2 -2.2 N.D. +0.1
complex community Community=arabino-guar; Passage=4 +0.2 -1.7 +0.2 N.D. -0.3
complex community Community=arabino-guar; Passage=4 +0.6 -1.1 -0.6 N.D. -0.1
complex community Community=Locust bean gum; Passage=4 +0.3 -0.6 -0.6 N.D. -0.3
complex community Community=Locust bean gum; Passage=4 -0.4 +0.0 -0.5 N.D. -0.3
complex community Community=guar; Passage=4 +0.1 -1.6 +0.4 N.D. +0.2
vitamin M9 with Supernatant from Cyptococcus -0.2 -0.2 -0.5 N.D. +0.1
complex community Community=Locust bean gum; Passage=4 -0.2 -0.4 -0.1 N.D. -0.0
vitamin M9 with calcium pantothenate 10 mg/mL +0.0 -0.4 -0.5 N.D. +0.1
vitamin M9 with Supernatant from Cyptococcus -0.1 -0.2 -0.5 N.D. +0.2
phage phage_bap4 +0.2 -0.1 -0.6 N.D. -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.2 -0.4 -0.1 N.D. -0.1
complex community Community=Locust bean gum; Passage=4 +0.2 -0.7 -0.2 N.D. +0.5
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.1 -0.4 +0.2 N.D. +0.1
complex community Community=guar; Passage=4 +0.2 -0.4 -0.2 N.D. +0.4
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.4 -0.3 +0.6 N.D. +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.0 -0.3 +0.4 N.D. +0.0
complex community Community=Kojac gum; Passage=1 +0.4 +0.1 -0.2 N.D. -0.1
vitamin M9 with Supernatant from Cyptococcus -0.2 +0.3 -0.2 N.D. +0.3
phage phage_bap4 +0.1 -0.2 +0.2 N.D. +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 -0.2 +0.4 N.D. +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.2 -0.1 +0.2 N.D. +0.2
complex community Community=guar; Passage=4 +0.1 -0.9 +1.1 N.D. +0.3
phage phage_bap4 +0.4 -0.0 +0.2 N.D. +0.2
complex community Community=Locust bean gum; Passage=1 +0.4 +0.4 +0.0 N.D. +0.1
complex community Community=arabino-guar; Passage=4 +0.5 -0.0 +0.3 N.D. +0.2
phage phage_bap4 +0.2 +0.1 +0.5 N.D. +0.2
phage phage_bap4 +0.1 +0.2 +0.9 N.D. +0.2
complex community Community=Kojac gum; Passage=4 +0.1 -0.1 +1.1 N.D. +0.3
complex community Community=arabino-guar; Passage=4 +0.2 +1.0 +0.8 N.D. +0.3
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