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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Hydrogenophaga sp. GW460-11-11-14-LB1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF4034 and GFF4035 overlap by 44 nucleotides
GFF4035 and GFF4036 are separated by 254 nucleotides
GFF4036 and GFF4037 are separated by 121 nucleotides
GFF4037 and GFF4038 are separated by 103 nucleotides
GFF4034 - Chromosome initiation inhibitor, at 951,233 to 952,135
GFF4034
GFF4035 - D-amino acid dehydrogenase small subunit (EC 1.4.99.1), at 952,092 to 953,339
GFF4035
GFF4036 - Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62), at 953,594 to 954,883
GFF4036
GFF4037 - TRAP transporter solute receptor, TAXI family precursor, at 955,005 to 955,982
GFF4037
GFF4038 - TRAP-type uncharacterized transport system, fused permease component, at 956,086 to 958,668
GFF4038
Group
Condition
GFF4034
GFF4035
GFF4036
GFF4037
GFF4038
carbon source
Ying_all64 rep C; time point 3
-0.5
-0.3
-0.3
-0.0
-0.0
carbon source
Ying_OrganicAcid7 rep B; time point 3
-0.1
-0.3
-0.2
-0.2
-0.1
carbon source
Ying_OrganicAcid7 rep A; time point 3
-0.4
-0.0
-0.4
-0.0
+0.1
carbon source
Ying_AminoAcid20 rep A; time point 1
-0.2
+0.1
-0.5
-0.0
-0.0
carbon source
Ying_AminoAcid20 rep A; time point 3
-0.3
+0.0
-0.3
-0.1
+0.0
carbon source
Ying_sugar7 rep B; time point 3
-0.4
-0.2
+0.2
-0.0
+0.0
carbon source
Ying_AminoAcid20 rep C; time point 3
-0.3
+0.0
+0.2
-0.1
+0.0
carbon source
Ying_Others16 rep B; time point 3
-0.7
-0.0
+0.4
+0.0
+0.2
carbon source
Ying_OrganicAcid7 rep C; time point 3
-0.3
-0.0
+0.3
+0.0
-0.1
carbon source
Ying_OrganicAcid7 rep B; time point 1
+0.4
-0.1
-0.4
-0.1
+0.0
carbon source
Ying_OrganicAcid7 rep C; time point 1
+0.5
-0.1
-0.4
-0.0
-0.0
carbon source
Ying_OrganicAcid7 rep C; time point 2
+0.4
-0.1
-0.3
+0.1
-0.1
carbon source
Ying_Others16 rep A; time point 3
-0.3
-0.1
+0.1
+0.2
+0.1
carbon source
Ying_all64 rep B; time point 1
+0.5
+0.1
-0.4
-0.1
+0.0
carbon source
Ying_all64 rep A; time point 3
-0.1
-0.1
+0.3
+0.2
+0.1
carbon source
Ying_Others16 rep B; time point 1
+0.5
+0.0
-0.2
+0.0
+0.0
carbon source
Ying_sugar7 rep C; time point 1
+0.5
-0.3
-0.0
+0.0
+0.0
carbon source
Ying_all64 rep C; time point 1
+0.3
+0.0
+0.1
-0.1
-0.1
carbon source
Ying_all64 rep B; time point 2
+0.4
+0.1
-0.1
+0.1
+0.1
carbon source
Ying_sugar7 rep C; time point 2
+0.3
+0.1
-0.1
+0.0
+0.1
carbon source
Ying_Nucleobase14 rep A; time point 1
+0.7
+0.1
-0.1
-0.0
-0.1
carbon source
Ying_OrganicAcid7 rep A; time point 1
+0.7
-0.1
-0.1
-0.0
-0.0
carbon source
Ying_Nucleobase14 rep A; time point 2
+0.5
-0.0
+0.1
+0.1
-0.0
carbon source
Ying_Others16 rep A; time point 2
+0.6
+0.2
-0.2
+0.1
+0.1
carbon source
Ying_Nucleobase14 rep C; time point 2
+0.8
+0.1
-0.2
+0.0
-0.0
carbon source
Ying_all64 rep A; time point 1
+0.4
+0.0
-0.0
+0.2
+0.1
carbon source
Ying_AminoAcid20 rep B; time point 2
+0.5
+0.2
+0.0
-0.0
+0.0
carbon source
Ying_Nucleobase14 rep C; time point 1
+0.7
+0.1
-0.1
-0.0
+0.2
carbon source
Ying_Nucleobase14 rep B; time point 2
+0.8
+0.1
-0.0
-0.1
+0.1
carbon source
Ying_Others16 rep A; time point 1
+0.5
+0.2
+0.1
+0.1
+0.0
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