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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Hydrogenophaga sp. GW460-11-11-14-LB1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF4023 and GFF4024 are separated by 252 nucleotides
GFF4024 and GFF4025 are separated by 4 nucleotides
GFF4025 and GFF4026 are separated by 60 nucleotides
GFF4026 and GFF4027 are separated by 12 nucleotides
GFF4023 - PUTATIVE METHYLTRANSFERASE, at 938,432 to 939,244
GFF4023
GFF4024 - OsmC family protein, at 939,497 to 940,024
GFF4024
GFF4025 - Transcriptional regulator, AraC family, at 940,029 to 941,009
GFF4025
GFF4026 - Cytosine deaminase (EC 3.5.4.1), at 941,070 to 941,510
GFF4026
GFF4027 - cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases, at 941,523 to 942,251
GFF4027
Group
Condition
GFF4023
GFF4024
GFF4025
GFF4026
GFF4027
carbon source
Ying_all64 rep A; time point 1
-0.7
-0.5
-0.1
-0.0
-0.1
carbon source
Ying_all64 rep C; time point 3
-0.1
+0.2
-1.0
-0.6
+0.3
carbon source
Ying_sugar7 rep C; time point 1
-0.8
-0.3
-0.1
+0.4
-0.4
carbon source
Ying_all64 rep C; time point 1
+0.3
-0.2
+0.0
-0.5
-0.6
carbon source
Ying_OrganicAcid7 rep B; time point 1
+0.1
-0.7
+0.2
-0.3
-0.1
carbon source
Ying_Others16 rep B; time point 1
+0.1
-0.1
-0.5
+0.2
-0.3
carbon source
Ying_sugar7 rep B; time point 1
+0.0
-0.6
+0.2
+0.0
-0.3
carbon source
Ying_AminoAcid20 rep C; time point 2
-0.6
-0.4
+0.3
+0.2
-0.0
carbon source
Ying_OrganicAcid7 rep C; time point 2
+0.5
-0.7
+0.3
-0.2
-0.3
carbon source
Ying_AminoAcid20 rep B; time point 1
-0.8
-0.2
+0.7
-0.0
-0.2
carbon source
Ying_Nucleobase14 rep C; time point 2
+0.7
-0.5
-0.2
-0.5
+0.2
carbon source
Ying_all64 rep B; time point 2
+0.2
+0.2
+0.1
-0.5
-0.2
carbon source
Ying_Nucleobase14 rep A; time point 2
+0.6
-0.5
-0.0
+0.1
-0.3
carbon source
Ying_all64 rep A; time point 2
+0.1
-0.3
+0.3
+0.1
-0.3
carbon source
Ying_OrganicAcid7 rep A; time point 2
+0.4
-0.3
-0.1
+0.3
-0.2
carbon source
Ying_sugar7 rep B; time point 2
+0.2
-0.1
+0.3
+0.5
-0.5
carbon source
Ying_Nucleobase14 rep B; time point 1
+0.4
-0.3
+0.2
+0.3
-0.1
carbon source
Ying_all64 rep B; time point 3
+0.2
+0.1
-0.3
+0.7
-0.1
carbon source
Ying_all64 rep C; time point 2
+0.6
-0.2
-0.0
+0.4
-0.0
carbon source
Ying_OrganicAcid7 rep C; time point 1
+0.6
-0.2
+0.4
-0.0
-0.1
carbon source
Ying_Others16 rep B; time point 2
+1.0
-0.2
-0.0
-0.0
+0.0
carbon source
Ying_AminoAcid20 rep A; time point 3
+0.6
+0.5
-0.2
-0.1
+0.3
carbon source
Ying_sugar7 rep A; time point 2
+0.2
-0.3
+0.4
+0.8
-0.1
carbon source
Ying_OrganicAcid7 rep B; time point 3
+1.0
-0.0
-0.3
+0.2
+0.2
carbon source
Ying_OrganicAcid7 rep A; time point 3
+0.2
-0.4
+0.2
+0.8
+0.5
carbon source
Ying_Others16 rep A; time point 3
+1.2
-0.6
-0.3
+0.6
+0.3
carbon source
Ying_sugar7 rep C; time point 3
+0.1
+0.2
-0.1
+0.7
+0.6
carbon source
Ying_Others16 rep B; time point 3
+0.7
-0.0
+0.1
+0.6
+0.1
carbon source
Ying_OrganicAcid7 rep C; time point 3
+0.8
+0.3
+0.4
-0.0
-0.1
carbon source
Ying_AminoAcid20 rep B; time point 3
+0.6
+0.7
+0.0
+0.1
+0.1
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