Fitness for 5 genes in Pseudomonas simiae WCS417

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500 ntPS417_20580 and PS417_20585 are separated by 390 nucleotidesPS417_20585 and PS417_20590 are separated by 52 nucleotidesPS417_20590 and PS417_20595 are separated by 156 nucleotidesPS417_20595 and PS417_20600 are separated by 141 nucleotides PS417_20580: PS417_20580 - isocitrate dehydrogenase, at 4,471,110 to 4,472,825 _20580 PS417_20585: PS417_20585 - chemotaxis protein, at 4,473,216 to 4,474,841 _20585 PS417_20590: PS417_20590 - multidrug DMT transporter permease, at 4,474,894 to 4,475,790 _20590 PS417_20595: PS417_20595 - hypothetical protein, at 4,475,947 to 4,476,693 _20595 PS417_20600: PS417_20600 - hypothetical protein, at 4,476,835 to 4,478,007 _20600
Group Condition PS417_20580 PS417_20585 PS417_20590 PS417_20595 PS417_20600
phage JP1 MOI 1 +0.0 -5.0 -0.2 -0.9 +0.2
phage JP1 MOI 1 +0.1 -4.5 -0.4 -0.3 -0.0
phage P. simiae Grant Run MOI 0.1 -0.2 -3.9 -0.5 -0.4 +0.0
phage P. simiae ORA MOI 1 -0.2 -4.5 +0.1 -0.4 +0.1
phage P. simiae OR Antrim MOI 10 -0.1 -3.0 -0.7 -0.7 +0.1
phage P. simiae OR Antrim MOI 0.1 -0.1 -4.1 -0.1 -0.3 +0.2
phage P. simiae Grant Run MOI 10 -0.1 -4.1 -0.4 -0.0 +0.4
phage P. simiae ORA MOI 10 -0.1 -4.0 -0.4 -0.1 +0.3
phage P. simiae OR Antrim MOI 0.1 -0.2 -3.7 -0.3 -0.2 +0.3
phage JP1 MOI 10 -0.2 -3.2 -0.3 -0.4 +0.1
phage P. simiae OR Antrim MOI 1 -0.1 -2.7 -0.5 -0.7 -0.0
phage P. simiae Grant Run MOI 10 -0.1 -3.2 -0.3 -0.2 +0.0
phage P. simiae OR Antrim MOI 10 -0.1 -3.7 +0.0 -0.1 +0.0
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.0 -2.5 -0.3 -0.7 -0.2
phage P. simiae ORA MOI 0.1 -0.1 -3.3 +0.1 -0.3 -0.0
phage P. simiae OR Antrim MOI 1 -0.2 -3.0 +0.1 -0.6 +0.4
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.2 -3.1 +0.1 -0.2 +0.1
phage JP1 MOI 10 -0.2 -2.4 -0.2 -0.2 -0.1
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.1 -2.8 +0.1 -0.5 +0.1
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.2 -1.9 -0.4 -0.3 -0.2
carbon source L-Valine (C) -2.3 -0.1 -0.6 -0.1 +0.2
phage P. simiae ORA MOI 0.1 -0.0 -3.1 +0.1 -0.2 +0.3
phage JP1 MOI 0.1 -0.1 -2.7 -0.0 -0.4 +0.4
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.1 -1.9 -0.0 -0.6 +0.1
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.2 -2.3 +0.0 -0.1 +0.2
phage P. simiae Grant Run MOI 0.1 -0.3 -2.0 -0.3 -0.2 +0.7
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.2 -1.6 +0.0 -0.7 +0.6
carbon source L-Valine (C) -2.2 +0.2 -0.2 +0.5 +0.7
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.1 +0.3 -0.4 +1.7 -0.8
phage Wcs_1 +0.1 +0.2 -0.6 +1.7 +0.7
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