Fitness for 5 genes in Pseudomonas simiae WCS417

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500 ntPS417_20570 and PS417_20575 are separated by 351 nucleotidesPS417_20575 and PS417_20580 are separated by 70 nucleotidesPS417_20580 and PS417_20585 are separated by 390 nucleotidesPS417_20585 and PS417_20590 are separated by 52 nucleotides PS417_20570: PS417_20570 - 3-oxoacyl-ACP synthase, at 4,465,655 to 4,466,776 _20570 PS417_20575: PS417_20575 - ATP-dependent helicase HrpA, at 4,467,128 to 4,471,039 _20575 PS417_20580: PS417_20580 - isocitrate dehydrogenase, at 4,471,110 to 4,472,825 _20580 PS417_20585: PS417_20585 - chemotaxis protein, at 4,473,216 to 4,474,841 _20585 PS417_20590: PS417_20590 - multidrug DMT transporter permease, at 4,474,894 to 4,475,790 _20590
Group Condition PS417_20570 PS417_20575 PS417_20580 PS417_20585 PS417_20590
phage JP1 MOI 1 -1.5 -0.4 +0.1 -4.5 -0.4
phage P. simiae Grant Run MOI 10 -0.9 -0.9 -0.1 -4.1 -0.4
phage P. simiae ORA MOI 1 -1.3 -0.4 -0.2 -4.5 +0.1
phage JP1 MOI 1 -0.6 -0.4 +0.0 -5.0 -0.2
phage JP1 MOI 10 -2.2 -0.1 -0.2 -3.2 -0.3
phage P. simiae Grant Run MOI 0.1 -0.7 -0.6 -0.2 -3.9 -0.5
phage P. simiae OR Antrim MOI 0.1 -0.9 -0.6 -0.2 -3.7 -0.3
phage P. simiae ORA MOI 10 -0.6 -0.3 -0.1 -4.0 -0.4
phage P. simiae Grant Run MOI 10 -1.2 -0.5 -0.1 -3.2 -0.3
phage P. simiae OR Antrim MOI 0.1 -0.1 -0.9 -0.1 -4.1 -0.1
phage P. simiae OR Antrim MOI 10 -0.5 -0.7 -0.1 -3.7 +0.0
phage P. simiae OR Antrim MOI 10 -0.6 -0.4 -0.1 -3.0 -0.7
phage JP1 MOI 10 -0.7 -0.9 -0.2 -2.4 -0.2
phage P. simiae ORA MOI 0.1 -0.7 -0.3 -0.1 -3.3 +0.1
phage P. simiae ORA MOI 0.1 -0.7 -0.5 -0.0 -3.1 +0.1
phage P. simiae OR Antrim MOI 1 -0.7 -0.2 -0.1 -2.7 -0.5
phage JP1 MOI 0.1 -0.4 -0.5 -0.1 -2.7 -0.0
phage P. simiae OR Antrim MOI 1 +0.2 -0.7 -0.2 -3.0 +0.1
phage P. simiae Grant Run MOI 0.1 -0.7 -0.3 -0.3 -2.0 -0.3
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.2 -0.2 -0.2 -3.1 +0.1
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -0.0 -0.0 -2.5 -0.3
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.7 +0.1 -0.1 -2.8 +0.1
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.0 +0.2 -0.2 -2.3 +0.0
carbon source L-Valine (C) +0.1 -0.5 -2.3 -0.1 -0.6
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.3 -0.4 -0.2 -1.9 -0.4
stress 1-ethyl-3-methylimidazolium chloride 200 mM -0.6 -1.0 -0.2 -1.0 -0.1
stress Choline chloride 300 mM -0.6 -0.7 -0.3 -1.1 -0.3
carbon source L-Valine (C) -0.2 -0.3 -2.2 +0.2 -0.2
stress methylglyoxal 0.032 vol% -0.1 -2.2 +0.6 +0.3 +0.2
stress Doxycycline hyclate 0.001 mg/ml -0.7 +2.2 +0.1 -0.3 +0.2
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