Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF4007 and GFF4008 are separated by 20 nucleotidesGFF4008 and GFF4009 are separated by 763 nucleotidesGFF4009 and GFF4010 are separated by 214 nucleotidesGFF4010 and GFF4011 overlap by 4 nucleotides GFF4007 - Glutamate carboxypeptidase (EC 3.4.17.11), at 213,932 to 215,230 GFF4007 GFF4008 - Transcriptional regulator, LysR family, at 215,251 to 216,153 GFF4008 GFF4009 - D-amino acid dehydrogenase (EC 1.4.99.6), at 216,917 to 218,128 GFF4009 GFF4010 - no description, at 218,343 to 219,683 GFF4010 GFF4011 - no description, at 219,680 to 220,813 GFF4011
Group Condition GFF4007 GFF4008 GFF4009 GFF4010 GFF4011
complex community Community=Locust bean gum; Passage=4 -0.0 -0.4 +0.2 -0.3 -0.1
complex community Community=guar; Passage=4 -0.4 +0.3 -0.0 -0.2 -0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 -0.4 +0.1 +0.0 -0.1
complex community Community=Locust bean gum; Passage=4 +0.0 -0.6 +0.4 -0.1 +0.0
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.3 -0.1 +0.1 +0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.2 +0.1 -0.0 -0.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 -0.2 +0.0 +0.0 +0.2
complex community Community=arabino-guar; Passage=4 -0.1 -0.5 +0.0 +0.5 +0.2
vitamin M9 with Supernatant from Cyptococcus +0.0 +0.2 -0.2 -0.0 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 +0.4 -0.1 -0.1 -0.0
phage phage_bap4 -0.1 +0.1 +0.1 +0.1 +0.1
vitamin M9 with Supernatant from Cyptococcus -0.1 +0.3 -0.0 +0.0 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 +0.0 -0.2 +0.1 +0.4
complex community Community=guar; Passage=4 -0.2 +0.2 +0.2 +0.4 -0.1
complex community Community=Locust bean gum; Passage=4 -0.2 +0.3 +0.3 -0.4 +0.3
phage phage_bap4 +0.2 +0.2 +0.1 +0.1 -0.1
no phage control no phage control -0.0 +0.2 +0.1 +0.1 +0.1
complex community Community=arabino-guar; Passage=4 -0.2 +0.2 -0.1 +0.1 +0.5
no phage control no phage control +0.2 +0.2 +0.0 +0.1 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 +0.2 +0.1 +0.1 +0.2
no phage control no phage control +0.2 +0.3 +0.1 +0.0 +0.1
complex community Community=Kojac gum; Passage=4 +0.1 +0.6 -0.1 +0.2 -0.1
complex community Community=arabino-guar; Passage=4 +0.3 +0.3 +0.1 -0.1 +0.1
complex community Community=arabino-guar; Passage=4 +0.2 +0.3 +0.1 +0.3 -0.3
complex community Community=Locust bean gum; Passage=4 +0.5 -0.1 +0.5 +0.0 -0.1
complex community Community=guar; Passage=4 +0.2 +0.2 +0.5 +0.0 -0.1
phage phage_bap4 +0.2 +0.0 +0.3 +0.5 +0.2
phage phage_bap4 +0.2 +0.2 +0.3 +0.3 +0.4
phage phage_bap4 +0.2 +0.2 +0.3 +0.4 +0.3
phage phage_bap4 +0.4 +0.4 +0.3 +0.4 +0.2
remove
GFF4007
plot		 remove
GFF4008
plot		 remove
GFF4009		 remove
GFF4010
plot		 remove
GFF4011
plot