Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF4002 and GFF4003 are separated by 28 nucleotidesGFF4003 and GFF4004 are separated by 9 nucleotidesGFF4004 and GFF4005 are separated by 58 nucleotidesGFF4005 and GFF4006 are separated by 97 nucleotides GFF4002 - Putative transmembrane protein, at 207,076 to 208,608 GFF4002 GFF4003 - FIGfam005179, at 208,637 to 209,467 GFF4003 GFF4004 - Homoserine kinase (EC 2.7.1.39), at 209,477 to 210,541 GFF4004 GFF4005 - hypothetical protein, at 210,600 to 210,977 GFF4005 GFF4006 - DNA polymerase I (EC 2.7.7.7), at 211,075 to 213,891 GFF4006
Group Condition GFF4002 GFF4003 GFF4004 GFF4005 GFF4006
complex community Community=Locust bean gum; Passage=4 -0.1 -0.1 N.D. -0.7 -1.5
complex community Community=Kojac gum; Passage=4 +0.1 +0.3 N.D. -0.6 -1.6
complex community Community=Locust bean gum; Passage=4 -0.3 -0.0 N.D. -0.5 -0.9
complex community Community=guar; Passage=4 +0.4 +0.6 N.D. -0.9 -1.7
complex community Community=guar; Passage=4 -0.1 -0.1 N.D. +0.7 -2.0
complex community Community=Locust bean gum; Passage=4 +0.5 +0.6 N.D. -1.3 -1.2
phage phage_bap4 -0.1 +0.1 N.D. -0.7 -0.6
phage phage_bap4 +0.2 +0.0 N.D. -0.5 -0.9
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 -0.0 N.D. -0.7 -0.5
complex community Community=arabino-guar; Passage=4 -0.3 +0.1 N.D. +0.4 -1.2
complex community Community=guar; Passage=4 -0.2 +0.4 N.D. -0.0 -1.3
complex community Community=arabino-guar; Passage=4 +0.2 +0.7 N.D. +0.2 -2.0
complex community Community=arabino-guar; Passage=4 +0.7 -0.2 N.D. -0.2 -1.1
no phage control no phage control +0.1 -0.0 N.D. -0.2 -0.6
vitamin M9 with calcium pantothenate 10 mg/mL +0.2 -0.2 N.D. -0.5 -0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.2 -0.1 N.D. -0.7 -0.1
complex community Community=Locust bean gum; Passage=4 +0.6 +0.5 N.D. -0.5 -1.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 +0.3 N.D. -0.2 -0.4
phage phage_bap4 +0.2 +0.2 N.D. +0.0 -0.8
complex community Community=guar; Passage=4 +0.2 +0.4 N.D. +0.1 -1.0
phage phage_bap4 +0.2 +0.2 N.D. -0.1 -0.5
phage phage_bap4 +0.1 +0.2 N.D. +0.2 -0.6
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.1 -0.3 N.D. +0.3 -0.3
phage phage_bap4 +0.1 +0.2 N.D. +0.2 -0.5
phage phage_bap4 +0.1 +0.3 N.D. +0.4 -0.7
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.1 -0.0 N.D. +0.6 -0.4
complex community Community=arabino-guar; Passage=4 +0.4 +0.4 N.D. +0.3 -0.9
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 +0.2 N.D. +0.6 -0.4
phage phage_bap4 +0.0 +0.4 N.D. +0.4 -0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.0 +0.2 N.D. +0.6 -0.2
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