Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

Or view all 552 experiments or choose conditions or try the comparative fitness browser

Group	Condition	PS417_00010	PS417_00015	PS417_00020	PS417_00025	PS417_00030
stress	Cisplatin 0.01 mg/ml	N.D.	-3.7	N.D.	+0.1	-0.2
phage	P. simiae OR Antrim MOI 1	N.D.	-0.7	N.D.	-0.3	-1.1
stress	methylglyoxal 0.032 vol%	N.D.	-0.5	N.D.	-0.3	-1.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	N.D.	-0.0	N.D.	-0.2	-1.5
motility	outer cut, LB soft agar motility assay	N.D.	-0.8	N.D.	-0.1	-0.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	-1.1	N.D.	+0.1	-0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Cysteine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	N.D.	-0.6	N.D.	+0.0	-0.9
soil	soil sample 4; outgrowth in LB	N.D.	-1.1	N.D.	+0.1	-0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	-0.7	N.D.	+0.2	-0.7
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.1x	N.D.	-0.4	N.D.	+0.2	-0.9
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	-0.6	N.D.	+0.3	-0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	-0.7	N.D.	-0.3	+0.5
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	N.D.	-0.5	N.D.	+0.6	-0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	-0.8	N.D.	-0.1	+0.7
soil	soil sample 8; outgrowth in LB	N.D.	-0.8	N.D.	+0.4	+0.5
liquid stress	Fraxetin 2 mM; liquid stress	N.D.	-0.6	N.D.	+1.3	+0.1
liquid stress	Scopoletin 3 mM; liquid stress	N.D.	-0.4	N.D.	+1.0	+0.5
liquid stress	Fraxetin 3 mM; liquid stress	N.D.	-0.3	N.D.	+1.4	-0.0
liquid stress	Scopoletin 2 mM; liquid stress	N.D.	-0.3	N.D.	+0.7	+0.6
liquid stress	80% Methanol 2 mM; liquid stress	N.D.	-0.2	N.D.	+0.8	+0.5
liquid stress	Scopoletin 3 mM; liquid stress	N.D.	-0.2	N.D.	+1.2	+0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	N.D.	-0.1	N.D.	-0.1	+1.6
liquid stress	80% Methanol 2 mM; liquid stress	N.D.	-0.1	N.D.	+1.0	+0.5
liquid stress	80% Methanol 2 mM; liquid stress	N.D.	-0.1	N.D.	+1.1	+0.4
liquid stress	80% Methanol 3 mM; liquid stress	N.D.	-0.2	N.D.	+1.1	+0.6
liquid stress	80% Methanol 3 mM; liquid stress	N.D.	-0.2	N.D.	+1.2	+0.7
liquid stress	80% Methanol 3 mM; liquid stress	N.D.	-0.2	N.D.	+1.3	+0.7
liquid stress	Fraxetin 3 mM; liquid stress	N.D.	-0.0	N.D.	+1.4	+0.5
liquid stress	Fraxetin 3 mM; liquid stress	N.D.	+0.0	N.D.	+1.6	+0.4
liquid stress	80% Methanol 3 mM; liquid stress	N.D.	+0.0	N.D.	+1.6	+0.5