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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF3996 and GFF3997 are separated by 299 nucleotides
GFF3997 and GFF3998 are separated by 221 nucleotides
GFF3998 and GFF3999 are separated by 25 nucleotides
GFF3999 and GFF4000 are separated by 206 nucleotides
GFF3996 - no description, at 197,382 to 197,504
GFF3996
GFF3997 - Short-chain dehydrogenase/reductase SDR, at 197,804 to 198,511
GFF3997
GFF3998 - putative esterase, at 198,733 to 199,599
GFF3998
GFF3999 - GMP reductase (EC 1.7.1.7), at 199,625 to 200,602
GFF3999
GFF4000 - ATP-dependent DNA helicase UvrD/PcrA (EC 3.6.4.12), at 200,809 to 203,250
GFF4000
Group
Condition
GFF3996
GFF3997
GFF3998
GFF3999
GFF4000
phage
phage_bap4
-0.5
-0.1
-0.1
-0.2
-1.8
complex community
Community=arabino-guar; Passage=4
+0.9
-1.4
+0.2
-0.8
-0.9
phage
phage_bap4
-0.6
-0.1
+0.0
+0.1
-1.5
no phage control
no phage control
-0.4
-0.0
-0.1
+0.1
-1.4
no phage control
no phage control
-0.1
-0.2
+0.1
+0.0
-1.5
phage
phage_bap4
-0.2
+0.4
+0.1
-0.1
-1.7
phage
phage_bap4
-0.1
-0.1
+0.0
+0.1
-1.3
no phage control
no phage control
+0.0
+0.3
-0.1
-0.0
-1.6
phage
phage_bap4
-0.0
-0.0
+0.1
+0.1
-1.5
phage
phage_bap4
-0.6
+0.3
+0.1
+0.1
-1.2
phage
phage_bap4
-0.2
+0.1
+0.1
+0.0
-1.4
phage
phage_bap4
-0.1
-0.1
+0.1
+0.0
-1.1
no phage control
no phage control
-0.1
-0.2
+0.1
+0.0
-0.9
complex community
Community=Locust bean gum; Passage=4
+0.6
-0.8
+0.0
-0.2
-0.4
complex community
Community=arabino-guar; Passage=4
-0.1
-0.2
+0.3
-0.4
-0.6
phage
phage_bap4
-0.1
+0.2
+0.1
+0.0
-1.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.2
-0.7
-0.2
+0.0
-0.2
complex community
Community=arabino-guar; Passage=4
-0.3
+0.3
+0.1
-0.3
-0.5
phage
phage_bap4
-0.1
-0.1
+0.2
+0.1
-0.7
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
+0.1
-0.0
-0.1
-0.1
-0.6
complex community
Community=guar; Passage=4
+0.2
+0.1
-0.2
+0.0
-0.7
complex community
Community=arabino-guar; Passage=4
-0.5
+0.5
-0.1
-0.3
-0.1
vitamin
M9 with Supernatant from Cyptococcus
-0.4
+0.1
+0.1
+0.1
-0.4
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-0.2
-0.3
+0.1
+0.1
-0.1
complex community
Community=guar; Passage=4
+0.1
-0.5
+0.1
+0.4
-0.4
complex community
Community=Locust bean gum; Passage=4
-0.5
+0.0
-0.1
+0.2
+0.1
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
+0.3
-0.3
-0.2
+0.2
-0.1
phage
phage_bap4
+0.2
+0.5
+0.1
+0.1
-0.7
complex community
Community=guar; Passage=4
+0.2
+0.6
+0.3
-0.1
-0.6
complex community
Community=Locust bean gum; Passage=4
+0.6
+1.2
+0.4
-0.2
-0.4
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