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Cofit
Protein
Homologs
Fitness for 5 genes in
Hydrogenophaga sp. GW460-11-11-14-LB1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF3978 and GFF3979 overlap by 8 nucleotides
GFF3979 and GFF3980 are separated by 11 nucleotides
GFF3980 and GFF3981 overlap by 4 nucleotides
GFF3981 and GFF3982 overlap by 4 nucleotides
GFF3978 - Periplasmic binding protein, at 894,073 to 894,894
GFF3978
GFF3979 - Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62), at 894,887 to 895,441
GFF3979
GFF3980 - Vitamin B12 ABC transporter, B12-binding component BtuF, at 895,453 to 896,322
GFF3980
GFF3981 - Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1), at 896,319 to 897,323
GFF3981
GFF3982 - Iron(III) dicitrate transport ATP-binding protein FecE (TC 3.A.1.14.1), at 897,320 to 898,081
GFF3982
Group
Condition
GFF3978
GFF3979
GFF3980
GFF3981
GFF3982
carbon source
Ying_Nucleobase14 rep C; time point 1
-1.3
N.D.
-1.5
N.D.
N.D.
carbon source
Ying_AminoAcid20 rep B; time point 3
-0.4
N.D.
-1.3
N.D.
N.D.
carbon source
Ying_AminoAcid20 rep A; time point 3
+0.2
N.D.
-1.9
N.D.
N.D.
carbon source
Ying_AminoAcid20 rep B; time point 2
-0.2
N.D.
-1.3
N.D.
N.D.
carbon source
Ying_all64 rep B; time point 3
-0.6
N.D.
-0.7
N.D.
N.D.
carbon source
Ying_Others16 rep B; time point 2
-0.0
N.D.
-1.3
N.D.
N.D.
carbon source
Ying_AminoAcid20 rep C; time point 2
+0.0
N.D.
-1.3
N.D.
N.D.
carbon source
Ying_AminoAcid20 rep C; time point 1
-0.4
N.D.
-0.8
N.D.
N.D.
carbon source
Ying_Others16 rep C; time point 3
-0.3
N.D.
-0.8
N.D.
N.D.
carbon source
Ying_OrganicAcid7 rep B; time point 2
+0.1
N.D.
-1.2
N.D.
N.D.
carbon source
Ying_AminoAcid20 rep C; time point 3
-0.1
N.D.
-1.0
N.D.
N.D.
carbon source
Ying_OrganicAcid7 rep C; time point 3
-0.3
N.D.
-0.8
N.D.
N.D.
carbon source
Ying_all64 rep A; time point 1
-0.2
N.D.
-0.7
N.D.
N.D.
carbon source
Ying_Others16 rep A; time point 1
-0.2
N.D.
-0.7
N.D.
N.D.
carbon source
Ying_OrganicAcid7 rep C; time point 1
-0.4
N.D.
-0.5
N.D.
N.D.
carbon source
Ying_Nucleobase14 rep A; time point 2
-0.1
N.D.
-0.7
N.D.
N.D.
carbon source
Ying_all64 rep B; time point 2
+0.0
N.D.
-0.9
N.D.
N.D.
carbon source
Ying_all64 rep B; time point 1
-0.0
N.D.
-0.8
N.D.
N.D.
carbon source
Ying_Others16 rep A; time point 2
-0.5
N.D.
-0.4
N.D.
N.D.
carbon source
Ying_OrganicAcid7 rep A; time point 1
+0.3
N.D.
-1.1
N.D.
N.D.
carbon source
Ying_Nucleobase14 rep B; time point 1
+0.5
N.D.
-1.3
N.D.
N.D.
carbon source
Ying_Others16 rep C; time point 1
+0.2
N.D.
-1.0
N.D.
N.D.
carbon source
Ying_OrganicAcid7 rep A; time point 2
+0.2
N.D.
-0.7
N.D.
N.D.
carbon source
Ying_sugar7 rep B; time point 1
-0.6
N.D.
+0.3
N.D.
N.D.
carbon source
Ying_Others16 rep A; time point 3
-0.4
N.D.
+0.4
N.D.
N.D.
carbon source
Ying_sugar7 rep A; time point 3
+0.2
N.D.
+0.7
N.D.
N.D.
carbon source
Ying_sugar7 rep A; time point 2
+0.5
N.D.
+0.5
N.D.
N.D.
carbon source
Ying_Others16 rep B; time point 3
+0.5
N.D.
+0.7
N.D.
N.D.
carbon source
Ying_all64 rep C; time point 2
+1.0
N.D.
+1.4
N.D.
N.D.
carbon source
Ying_all64 rep C; time point 3
+0.9
N.D.
+1.7
N.D.
N.D.
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