Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

Or view all 554 experiments or choose conditions or try the comparative fitness browser

Group	Condition	PS417_20355	PS417_20360	PS417_20365	PS417_20370	PS417_20375
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.7	-0.2	-1.1	-0.2	+0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.5	-0.0	-0.6	-0.2	-0.6
carbon source	2'-Deoxyinosine 5 mM (C)	-0.2	-0.4	-0.9	+0.2	-0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.0	-0.3	-0.9	-0.1	-0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.2	+0.2	-1.1	-0.4	-0.4
stress	Neomycin 0.04 mg/ml	-0.1	-0.3	-0.8	-0.4	+0.1
phage	JP1 MOI 10	-0.5	-0.4	+0.5	+0.0	-0.6
soil	soil sample 7; outgrowth in LB	-0.9	-0.1	-0.1	+0.1	+0.4
phage	P. simiae OR Antrim MOI 1	-0.7	+0.2	-0.4	-0.3	+0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.2	+0.3	-0.9	+0.7	-0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.6	+0.2	+0.4	-0.3	+0.0
agar plate interaction control	Taped volatile agar plate with no fungus	+0.3	-0.3	-0.4	-0.2	+0.3
carbon source	L-Valine (C)	+0.2	+0.1	-0.4	+0.5	-0.5
soil	soil sample 5; outgrowth in LB	-0.2	-0.2	+0.5	+0.2	-0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.3	-0.0	-0.7	+0.2	+0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.3	+0.7	+0.2	-0.5	+0.0
seeds	Growth on radish seeds for 72 hours	+0.5	-0.1	+0.4	-0.2	-0.5
stress	1-ethyl-3-methylimidazolium chloride 200 mM	-0.1	-0.1	+0.7	-0.4	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.3	-0.4	-0.1	+0.4	+0.2
motility	inner cut, LB soft agar motility assay	+0.3	+0.2	-0.3	-0.1	+0.6
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.6	+0.2	-0.4	+0.5	-0.2
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.7	-0.4	+0.2	+0.2	+0.1
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	+0.1	-0.3	+0.8	+0.2	+0.3
motility	outer cut, LB soft agar motility assay	+0.4	+0.4	-0.4	+0.1	+0.4
rhizosphere	rhizosphere sample 2; outgrowth in LB	+0.5	+0.7	-0.5	-0.0	+0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.2	+0.6	+0.3	+0.3	+0.2
carbon source	2'-Deoxyinosine 5 mM (C)	+0.2	+0.1	+1.3	-0.0	+0.0
stress	LB_noSalt with Chloride 1100 mM	+0.3	+0.4	+0.0	+0.4	+0.6
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.2	+0.0	+0.7	+0.8	-0.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.1	+0.6	+0.5	+0.1	+0.5