Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF3943 and GFF3944 overlap by 4 nucleotidesGFF3944 and GFF3945 are separated by 123 nucleotidesGFF3945 and GFF3946 are separated by 13 nucleotidesGFF3946 and GFF3947 are separated by 19 nucleotides GFF3943 - Poly(A) polymerase (EC 2.7.7.19), at 146,504 to 148,135 GFF3943 GFF3944 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3), at 148,132 to 148,770 GFF3944 GFF3945 - Phosphate transport regulator (distant homolog of PhoU), at 148,894 to 149,538 GFF3945 GFF3946 - Probable low-affinity inorganic phosphate transporter, at 149,552 to 150,562 GFF3946 GFF3947 - Putative transmembrane protein, at 150,582 to 151,028 GFF3947
Group Condition GFF3943 GFF3944 GFF3945 GFF3946 GFF3947
complex community Community=arabino-guar; Passage=4 -2.2 N.D. -0.2 -0.3 -0.0
complex community Community=guar; Passage=4 -1.6 N.D. +0.1 -0.2 -0.5
complex community Community=Locust bean gum; Passage=4 -2.5 N.D. +0.9 +0.3 -0.5
complex community Community=arabino-guar; Passage=4 -2.1 N.D. +0.0 +0.0 +0.3
complex community Community=Locust bean gum; Passage=4 -1.9 N.D. +0.0 +0.1 +0.0
complex community Community=arabino-guar; Passage=4 -2.2 N.D. +0.4 +0.2 +0.2
complex community Community=Locust bean gum; Passage=4 -1.9 N.D. +0.6 +0.1 -0.2
complex community Community=guar; Passage=4 -2.2 N.D. +0.2 +0.1 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.4 N.D. -0.4 -0.3 -0.1
vitamin M9 with Supernatant from Cyptococcus -0.2 N.D. -0.3 -0.0 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.5 N.D. -0.2 -0.3 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.6 N.D. -0.1 -0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.3 N.D. -0.2 -0.3 -0.0
complex community Community=guar; Passage=4 -1.3 N.D. +0.5 -0.1 -0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.0 N.D. -0.1 -0.4 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.5 N.D. -0.3 -0.1 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.2 N.D. -0.4 -0.2 +0.1
phage phage_bap4 -0.5 N.D. +0.2 -0.1 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.2 N.D. -0.3 -0.3 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.2 N.D. -0.4 -0.4 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 N.D. -0.2 -0.3 -0.3
complex community Community=guar; Passage=4 -1.3 N.D. +0.1 +0.5 +0.1
complex community Community=arabino-guar; Passage=4 -1.6 N.D. +0.7 +0.6 -0.1
complex community Community=Locust bean gum; Passage=4 -0.7 N.D. +0.3 +0.1 -0.2
no phage control no phage control -0.5 N.D. +0.2 -0.2 +0.1
phage phage_bap4 +0.4 N.D. +0.1 -0.1 -0.6
complex community Community=Kojac gum; Passage=4 -0.1 N.D. +0.4 +0.2 -0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.2 N.D. -0.4 -0.2 +0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.3 N.D. -0.3 -0.1 +0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.7 N.D. -0.1 -0.3 -0.1
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