Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF3941 and GFF3942 are separated by 67 nucleotidesGFF3942 and GFF3943 are separated by 28 nucleotidesGFF3943 and GFF3944 overlap by 4 nucleotidesGFF3944 and GFF3945 are separated by 123 nucleotides GFF3941 - Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1), at 144,609 to 145,649 GFF3941 GFF3942 - DnaA inactivator Hda (shorter homolog of DnaA), at 145,717 to 146,475 GFF3942 GFF3943 - Poly(A) polymerase (EC 2.7.7.19), at 146,504 to 148,135 GFF3943 GFF3944 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3), at 148,132 to 148,770 GFF3944 GFF3945 - Phosphate transport regulator (distant homolog of PhoU), at 148,894 to 149,538 GFF3945
Group Condition GFF3941 GFF3942 GFF3943 GFF3944 GFF3945
complex community Community=arabino-guar; Passage=4 -4.7 N.D. -2.2 N.D. -0.2
complex community Community=arabino-guar; Passage=4 -4.8 N.D. -2.1 N.D. +0.0
complex community Community=guar; Passage=4 -4.6 N.D. -2.2 N.D. +0.2
complex community Community=Locust bean gum; Passage=4 -4.7 N.D. -2.5 N.D. +0.9
complex community Community=Locust bean gum; Passage=4 -4.4 N.D. -1.9 N.D. +0.0
complex community Community=guar; Passage=4 -4.7 N.D. -1.6 N.D. +0.1
complex community Community=guar; Passage=4 -5.0 N.D. -1.3 N.D. +0.1
complex community Community=arabino-guar; Passage=4 -5.0 N.D. -1.6 N.D. +0.7
complex community Community=Locust bean gum; Passage=4 -4.6 N.D. -1.9 N.D. +0.6
complex community Community=guar; Passage=4 -4.9 N.D. -1.3 N.D. +0.5
complex community Community=arabino-guar; Passage=4 -3.4 N.D. -2.2 N.D. +0.4
complex community Community=Locust bean gum; Passage=4 -4.4 N.D. -0.7 N.D. +0.3
complex community Community=Kojac gum; Passage=4 -4.5 N.D. -0.1 N.D. +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -2.6 N.D. -0.4 N.D. -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -2.5 N.D. -0.5 N.D. -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -2.6 N.D. -0.2 N.D. -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -2.4 N.D. -0.6 N.D. -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -2.4 N.D. -0.2 N.D. -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -2.6 N.D. -0.2 N.D. -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -2.6 N.D. -0.1 N.D. -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -2.2 N.D. -0.5 N.D. -0.3
phage phage_bap4 -2.4 N.D. -0.3 N.D. -0.2
vitamin M9 with Supernatant from Cyptococcus -2.3 N.D. -0.2 N.D. -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -2.6 N.D. +0.2 N.D. -0.4
vitamin M9 with Supernatant from Cyptococcus -2.6 N.D. -0.2 N.D. -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -2.5 N.D. -0.2 N.D. -0.1
no phage control no phage control -2.4 N.D. -0.5 N.D. +0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -2.3 N.D. +0.3 N.D. -0.3
vitamin M9 with calcium pantothenate 10 mg/mL -2.5 N.D. +0.4 N.D. +0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -2.5 N.D. +0.7 N.D. -0.1
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