Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF3938 and GFF3939 overlap by 4 nucleotidesGFF3939 and GFF3940 are separated by 125 nucleotidesGFF3940 and GFF3941 are separated by 51 nucleotidesGFF3941 and GFF3942 are separated by 67 nucleotides GFF3938 - Intracellular protease, at 142,157 to 142,783 GFF3938 GFF3939 - Hydrolase, HAD superfamily, at 142,780 to 143,340 GFF3939 GFF3940 - putative membrane protein, at 143,466 to 144,557 GFF3940 GFF3941 - Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1), at 144,609 to 145,649 GFF3941 GFF3942 - DnaA inactivator Hda (shorter homolog of DnaA), at 145,717 to 146,475 GFF3942
Group Condition GFF3938 GFF3939 GFF3940 GFF3941 GFF3942
complex community Community=guar; Passage=4 +0.0 -0.2 -0.2 -4.9 N.D.
complex community Community=guar; Passage=4 -0.0 +0.2 -0.5 -4.7 N.D.
complex community Community=arabino-guar; Passage=4 +0.1 -0.0 -0.1 -4.8 N.D.
complex community Community=guar; Passage=4 +0.3 -0.2 -0.1 -4.6 N.D.
complex community Community=guar; Passage=4 +0.2 -0.1 +0.2 -5.0 N.D.
complex community Community=arabino-guar; Passage=4 +0.2 +0.3 -0.1 -5.0 N.D.
complex community Community=Locust bean gum; Passage=4 -0.0 +0.0 +0.1 -4.6 N.D.
complex community Community=Kojac gum; Passage=4 -0.1 +0.1 +0.1 -4.5 N.D.
complex community Community=arabino-guar; Passage=4 +0.1 +0.1 +0.5 -4.7 N.D.
complex community Community=Locust bean gum; Passage=4 -0.1 +0.6 -0.1 -4.4 N.D.
complex community Community=Locust bean gum; Passage=4 +0.3 +0.6 -0.1 -4.7 N.D.
complex community Community=Locust bean gum; Passage=4 +0.2 +0.6 +0.0 -4.4 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 -0.1 +0.1 -2.5 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.1 +0.1 +0.1 -2.6 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.0 -0.2 +0.1 -2.5 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.2 -0.1 -0.1 -2.6 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 -0.1 +0.1 -2.6 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 +0.1 +0.1 -2.6 N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 +0.1 +0.1 -2.5 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 +0.1 +0.1 -2.6 N.D.
vitamin M9 with Supernatant from Cyptococcus -0.1 +0.1 +0.2 -2.5 N.D.
complex community Community=arabino-guar; Passage=4 +0.3 +0.7 +0.1 -3.4 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.2 +0.1 -0.0 -2.5 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.2 +0.3 +0.1 -2.4 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.0 +0.3 +0.0 -2.5 N.D.
vitamin M9 with Supernatant from Cyptococcus +0.2 +0.1 +0.0 -2.6 N.D.
phage phage_bap4 +0.0 +0.1 +0.2 -2.4 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 +0.1 +0.1 -2.3 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 +0.1 +0.2 -2.3 N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.2 +0.4 +0.1 -2.5 N.D.
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