Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_20150	PS417_20155	PS417_20160	PS417_20165	PS417_20170
carbon source	L-Valine (C)	N.D.	-0.3	-5.6	+0.3	-1.1
carbon source	Gly-Glu (C)	N.D.	-0.6	-4.2	-0.1	-0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	+0.1	-5.7	+0.2	+0.2
carbon source	L-Alanine (C)	N.D.	-0.4	-4.1	+0.0	-0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	-0.5	-4.2	+0.1	-0.1
carbon source	NAG (C)	N.D.	-0.4	-3.7	+0.0	-0.5
exudates	RCH2_defined_glucose with Brachypodium distachyon 27-day exudates 1x	N.D.	-0.2	-4.1	-0.2	-0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	-0.1	-3.8	+0.3	-0.7
carbon source	L-Isoleucine (C)	N.D.	-0.3	-3.2	+0.0	-0.8
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	N.D.	-0.1	-3.2	-0.1	-1.0
carbon source	L-Histidine (C)	N.D.	-0.2	-3.8	+0.0	-0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	-0.3	-4.5	+0.3	+0.2
carbon source	L-Leucine (C)	N.D.	-0.1	-4.4	+0.0	+0.2
carbon source	octanoate (C)	N.D.	-0.7	-3.1	-0.1	-0.3
carbon source	NAG (C)	N.D.	-0.4	-3.5	-0.1	-0.2
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	N.D.	-0.2	-4.9	+0.0	+0.9
carbon source	octanoate (C)	N.D.	-0.2	-3.5	-0.2	-0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	-0.3	-2.7	+0.1	-1.1
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	N.D.	-0.4	-2.8	-0.1	-0.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	+0.2	-2.8	+0.1	-1.6
carbon source	a-Ketoglutaric (C)	N.D.	-0.2	-3.8	-0.0	+0.1
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	N.D.	-0.5	-3.4	+0.1	+0.1
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	N.D.	-0.1	-3.8	-0.1	+0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	+0.1	-5.1	+0.2	+1.0
carbon source	L-Valine (C)	N.D.	+0.1	-3.9	+0.1	+0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	+0.0	-4.1	+0.1	+0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	+0.1	-3.9	+0.3	+0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	-0.2	-3.8	+0.3	+0.4
carbon source	2-Deoxy-D-Ribose (C)	N.D.	+0.2	-3.3	-0.0	+0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	-0.0	-3.3	+0.3	+1.4