Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

Or view all 554 experiments or choose conditions or try the comparative fitness browser

Group	Condition	PS417_20045	PS417_20050	PS417_20055	PS417_20060	PS417_20065
nitrogen source	Adenosine (N)	-2.0	-2.1	+0.2	-1.8	N.D.
ecofab	LB in EcoFAB_3.5mL	-0.9	-0.9	-0.4	-0.9	N.D.
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.4	-0.3	-1.2	-0.6	N.D.
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-0.2	-0.9	-0.4	-0.8	N.D.
carbon source	2'-Deoxyinosine 5 mM (C)	-0.1	-0.5	-1.5	-0.2	N.D.
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.6	-0.5	-0.3	-0.7	N.D.
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.0	-0.4	-1.2	-0.5	N.D.
carbon source	Gly-Glu (C)	-0.5	-0.8	-0.3	-0.5	N.D.
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-0.2	-0.6	-0.5	-0.7	N.D.
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.4	-0.4	-0.9	-0.3	N.D.
supernatant control	Vogels_fungal_media 0.1X	-0.8	-0.7	-0.2	-0.4	N.D.
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.6	-0.4	-0.4	-0.5	N.D.
soil	soil sample 7; outgrowth in LB	-0.5	-0.6	-0.2	-0.7	N.D.
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.4	-1.0	+0.1	-0.6	N.D.
stress	LB_noSalt with Chloride 1100 mM	-0.4	-0.7	-0.5	-0.4	N.D.
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.2	-0.5	-0.6	-0.5	N.D.
soil	soil sample 6; outgrowth in LB	-0.2	-0.4	-0.9	-0.3	N.D.
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.6	-0.5	-0.5	-0.2	N.D.
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.5	-1.0	+0.2	-0.5	N.D.
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.3	-0.6	-0.4	-0.5	N.D.
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.9	-0.6	+0.5	-0.4	N.D.
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-0.5	-0.5	+0.5	-0.9	N.D.
agar plate interaction control	Taped volatile agar plate with no fungus	-0.7	-0.0	+0.3	-0.8	N.D.
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.9	-0.6	+0.7	-0.5	N.D.
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.7	-0.3	+0.8	-0.3	N.D.
carbon source	octanoate (C)	-0.2	-0.4	+0.8	-0.6	N.D.
carbon source	octanoate (C)	-0.2	-0.4	+0.8	-0.4	N.D.
seeds	Growth on radish seeds for 24 hours	-0.7	-0.7	+1.3	-0.1	N.D.
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.7	-0.5	+0.3	-0.4	N.D.
nitrogen source	Glycine (N)	+2.5	+2.9	-0.1	+2.7	N.D.