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Cofit
Protein
Homologs
Fitness for 5 genes in
Hydrogenophaga sp. GW460-11-11-14-LB1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF3914 and GFF3915 are separated by 150 nucleotides
GFF3915 and GFF3916 are separated by 46 nucleotides
GFF3916 and GFF3917 are separated by 5 nucleotides
GFF3917 and GFF3918 are separated by 105 nucleotides
GFF3914 - Alkyl hydroperoxide reductase protein C (EC 1.6.4.-), at 827,404 to 827,967
GFF3914
GFF3915 - Alkyl hydroperoxide reductase protein F (EC 1.6.4.-), at 828,118 to 829,707
GFF3915
GFF3916 - Acetate permease ActP (cation/acetate symporter), at 829,754 to 831,451
GFF3916
GFF3917 - Putative membrane protein, clustering with ActP, at 831,457 to 831,765
GFF3917
GFF3918 - hypothetical protein, at 831,871 to 832,053
GFF3918
Group
Condition
GFF3914
GFF3915
GFF3916
GFF3917
GFF3918
carbon source
Ying_all64 rep C; time point 3
-0.3
-0.5
+0.0
+0.2
N.D.
carbon source
Ying_all64 rep A; time point 1
-0.1
-0.2
+0.1
-0.3
N.D.
carbon source
Ying_AminoAcid20 rep A; time point 2
+0.1
-0.3
-0.1
-0.1
N.D.
carbon source
Ying_all64 rep B; time point 3
-0.2
-0.1
+0.0
-0.0
N.D.
carbon source
Ying_all64 rep C; time point 2
+0.1
-0.3
-0.1
+0.0
N.D.
carbon source
Ying_AminoAcid20 rep B; time point 2
+0.0
-0.2
+0.1
-0.2
N.D.
carbon source
Ying_all64 rep A; time point 3
-0.2
-0.1
+0.0
+0.0
N.D.
carbon source
Ying_all64 rep A; time point 2
-0.2
-0.2
+0.1
+0.0
N.D.
carbon source
Ying_Others16 rep B; time point 2
-0.1
-0.1
+0.1
-0.1
N.D.
carbon source
Ying_all64 rep B; time point 2
-0.2
-0.1
+0.0
+0.1
N.D.
carbon source
Ying_OrganicAcid7 rep C; time point 1
-0.1
-0.0
+0.1
-0.1
N.D.
carbon source
Ying_all64 rep C; time point 1
-0.2
-0.2
+0.1
+0.1
N.D.
carbon source
Ying_Nucleobase14 rep A; time point 2
-0.1
+0.1
+0.1
-0.2
N.D.
carbon source
Ying_AminoAcid20 rep A; time point 1
+0.2
-0.2
-0.0
-0.1
N.D.
carbon source
Ying_sugar7 rep A; time point 1
+0.1
-0.2
+0.0
-0.0
N.D.
carbon source
Ying_sugar7 rep B; time point 1
+0.1
-0.1
+0.1
-0.1
N.D.
carbon source
Ying_Nucleobase14 rep C; time point 1
+0.2
+0.1
+0.1
-0.3
N.D.
carbon source
Ying_AminoAcid20 rep B; time point 1
+0.2
-0.2
+0.1
-0.0
N.D.
carbon source
Ying_sugar7 rep C; time point 3
+0.1
-0.1
+0.1
+0.0
N.D.
carbon source
Ying_sugar7 rep A; time point 2
+0.2
-0.1
+0.1
-0.1
N.D.
carbon source
Ying_AminoAcid20 rep C; time point 3
+0.2
-0.1
+0.1
+0.0
N.D.
carbon source
Ying_AminoAcid20 rep C; time point 2
+0.3
-0.2
+0.1
-0.0
N.D.
carbon source
Ying_OrganicAcid7 rep C; time point 3
-0.1
+0.1
+0.1
+0.1
N.D.
carbon source
Ying_sugar7 rep B; time point 2
+0.1
-0.1
+0.1
+0.1
N.D.
carbon source
Ying_AminoAcid20 rep C; time point 1
+0.2
-0.1
-0.0
+0.2
N.D.
carbon source
Ying_sugar7 rep C; time point 1
+0.1
-0.1
+0.2
+0.0
N.D.
carbon source
Ying_Nucleobase14 rep C; time point 2
+0.3
+0.1
+0.0
-0.0
N.D.
carbon source
Ying_sugar7 rep C; time point 2
+0.2
+0.0
+0.1
+0.0
N.D.
carbon source
Ying_Nucleobase14 rep B; time point 2
+0.2
+0.0
+0.1
+0.1
N.D.
carbon source
Ying_Others16 rep A; time point 3
+0.3
+0.0
+0.1
+0.1
N.D.
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