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Cofit
Protein
Homologs
Fitness for 5 genes in
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF3907 and GFF3908 overlap by 19 nucleotides
GFF3908 and GFF3909 overlap by 1 nucleotides
GFF3909 and GFF3910 overlap by 1 nucleotides
GFF3910 and GFF3911 overlap by 4 nucleotides
GFF3907 - Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-), at 188,707 to 189,483
GFF3907
GFF3908 - Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16), at 189,465 to 190,202
GFF3908
GFF3909 - Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-), at 190,202 to 190,792
GFF3909
GFF3910 - Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19), at 190,792 to 191,859
GFF3910
GFF3911 - Histidinol-phosphate aminotransferase (EC 2.6.1.9), at 191,856 to 192,935
GFF3911
Group
Condition
GFF3907
GFF3908
GFF3909
GFF3910
GFF3911
phage
LB_plus_SM_buffer with 6F2_phage 15 MOI
-0.6
-0.4
-0.3
-0.3
+0.0
phage
LB_plus_SM_buffer with FelixO1_phage (wt new) 0.75 MOI
-0.5
+0.1
+0.0
-0.1
-1.2
phage
6F2_phage 15 MOI
-0.5
-0.1
-0.6
-0.2
+0.2
phage
LB_plus_SM_buffer with 6F2_phage 15 MOI
-0.4
-0.5
-0.0
+0.1
-0.2
phage
LB_plus_SM_buffer with ES18h1_phage 0.00075 MOI
+0.1
-0.8
-0.1
-0.0
-0.2
phage
LB_plus_SM_buffer with 6C2_phage 15 MOI
-0.7
-0.2
+0.1
-0.1
-0.2
phage
LB_plus_SM_buffer with 6D2_phage 15 MOI
-0.4
-0.4
+0.2
-0.1
-0.3
phage
LB_plus_SM_buffer with FelixO1_phage 0.05 MOI
-0.5
+0.0
+0.3
+0.1
-0.4
phage
LB_plus_SM_buffer with FelixO1_phage 0.5 MOI
-0.4
-0.5
+0.1
+0.2
+0.2
phage
phi19h1_phage 15 MOI
-1.3
+0.8
-0.1
-0.0
+0.2
phage
phi19h1_phage 15 MOI
-0.8
+0.3
-0.1
+0.2
+0.1
phage
LB_plus_SM_buffer with Br60_phage 0.0005 MOI
+0.2
-0.8
+0.1
+0.1
+0.1
phage
LB_plus_SM_buffer with EIP16_phage 8.75 MOI
+0.7
-0.3
+0.2
+0.1
-1.0
phage
LB_plus_SM_buffer with ES18h1_phage 0.75 MOI
-1.2
+1.0
-0.0
-0.2
+0.1
phage
LB_plus_SM_buffer with FelixO1_phage (wt new) 0.075 MOI
-0.2
+0.4
+0.2
+0.1
-0.7
phage
LB_plus_SM_buffer with 6H2_phage 0.5 MOI
-0.2
+0.4
-0.4
-0.3
+0.3
phage
LB_plus_SM_buffer with 6D2_phage 0.75 MOI
-0.4
+0.9
-0.7
-0.1
+0.2
nophagecontrol
No phage control
-0.4
+0.4
-0.2
+0.0
+0.4
phage
Ffm_phage 10 MOI; agar plate assay
+0.0
+0.2
+0.3
-0.8
+0.4
phage
LB_plus_SM_buffer with 8C2_phage 15 MOI
-0.2
+0.4
+0.4
-0.5
+0.1
phage
6H2_phage 10 MOI; agar plate assay
-0.8
+0.1
+0.2
+0.4
+0.3
micoeukaryotes
C.elegans, mixed culture-2
+0.4
+0.1
+0.4
-0.1
-0.4
phage
LB_plus_SM_buffer with EIP16_phage 0.875 MOI
+0.6
+0.3
-0.2
+0.0
-0.3
phage
LB_plus_SM_buffer with EIP30_phage 0.0000875 MOI
+0.6
-0.1
+0.2
+0.2
-0.4
phage
LB_plus_SM_buffer with 6C2_phage 0.25 MOI
-0.1
+0.8
-0.1
-0.1
+0.5
phage
LB_plus_SM_buffer with Ffm_phage 18.75 MOI
+0.6
+0.4
+0.1
+0.2
-0.3
phage
LB_plus_SM_buffer with Ffm_phage 0.000001875 MOI
+0.5
+0.6
-0.3
+0.2
-0.0
phage
LB_plus_SM_buffer with Ffm_phage 0.001875 MOI
-0.0
+0.5
+0.4
+0.3
-0.0
phage
LB_plus_SM_buffer with Ffm_phage 0.0001875 MOI
+0.5
+0.3
+0.1
+0.3
+0.1
phage
LB_plus_SM_buffer with 6F2_phage 0.1875 MOI
+0.1
+0.6
-0.2
+0.2
+0.6
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