Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF3902 and GFF3903 overlap by 4 nucleotidesGFF3903 and GFF3904 are separated by 34 nucleotidesGFF3904 and GFF3905 are separated by 80 nucleotidesGFF3905 and GFF3906 are separated by 170 nucleotides GFF3902 - Trans-aconitate 2-methyltransferase (EC 2.1.1.144), at 103,792 to 104,583 GFF3902 GFF3903 - Similar to citrate lyase beta chain, 10, at 104,580 to 105,581 GFF3903 GFF3904 - Probable signal peptide protein, at 105,616 to 106,188 GFF3904 GFF3905 - Aconitate hydratase 2 (EC 4.2.1.3), at 106,269 to 108,854 GFF3905 GFF3906 - Acyl-CoA dehydrogenase, at 109,025 to 111,304 GFF3906
Group Condition GFF3902 GFF3903 GFF3904 GFF3905 GFF3906
complex community Community=Locust bean gum; Passage=4 -0.2 -0.2 -5.2 -2.5 -0.2
complex community Community=guar; Passage=4 -0.3 -0.2 -2.0 -2.0 +0.3
complex community Community=guar; Passage=4 -0.5 -0.3 -1.4 -2.2 +0.4
complex community Community=arabino-guar; Passage=4 -0.3 +0.7 -1.5 -2.9 +0.4
complex community Community=Locust bean gum; Passage=4 -0.5 -1.1 -0.2 -1.9 +0.2
complex community Community=Kojac gum; Passage=4 +0.2 -0.2 -1.8 -1.6 +0.0
complex community Community=guar; Passage=4 +0.1 +0.0 -0.9 -1.9 +0.0
complex community Community=guar; Passage=4 -0.1 -0.3 +0.4 -2.1 -0.1
phage phage_bap4 -0.2 -0.6 -0.8 -0.3 -0.3
complex community Community=arabino-guar; Passage=4 -0.1 +0.1 +0.2 -2.5 +0.3
complex community Community=arabino-guar; Passage=4 -0.6 +0.1 +0.0 -1.5 +0.2
complex community Community=Locust bean gum; Passage=4 -0.5 -0.8 +1.4 -1.9 +0.0
complex community Community=Locust bean gum; Passage=4 -0.4 -0.1 +0.5 -2.1 +0.3
phage phage_bap4 -0.0 -0.2 +0.0 -1.5 -0.0
phage phage_bap4 -0.2 -0.6 -0.0 -0.6 -0.1
no phage control no phage control +0.1 -0.2 -0.2 -1.3 +0.1
complex community Community=arabino-guar; Passage=4 -0.0 -0.4 -0.0 -1.4 +0.4
phage phage_bap4 -0.3 -0.4 +0.4 -0.8 -0.2
no phage control no phage control +0.0 -0.1 -0.1 -1.1 +0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.2 -0.1 -0.5 -0.4 -0.1
no phage control no phage control +0.1 -0.1 +0.0 -1.2 +0.0
vitamin M9 with Supernatant from Cyptococcus -0.3 -0.1 -0.2 -0.6 +0.1
no phage control no phage control -0.2 +0.0 -0.1 -1.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.3 -0.2 -0.5 -0.2 +0.0
vitamin M9 with Supernatant from Cyptococcus -0.2 +0.1 -0.5 -0.4 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL -0.2 -0.2 -0.6 +0.2 +0.1
phage phage_bap4 +0.0 -0.1 +0.5 -1.1 +0.1
complex community Community=Kojac gum; Passage=1 +0.1 +0.3 -0.2 -0.5 +0.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.3 -0.1 +0.5 +0.3 -0.0
phage phage_bap4 +0.1 +0.2 +0.6 -0.6 +0.0
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