Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF3900 and GFF3901 are separated by 184 nucleotidesGFF3901 and GFF3902 are separated by 12 nucleotidesGFF3902 and GFF3903 overlap by 4 nucleotidesGFF3903 and GFF3904 are separated by 34 nucleotides GFF3900 - Transcriptional regulator, GntR family, at 101,850 to 102,608 GFF3900 GFF3901 - Malate dehydrogenase (EC 1.1.1.37), at 102,793 to 103,779 GFF3901 GFF3902 - Trans-aconitate 2-methyltransferase (EC 2.1.1.144), at 103,792 to 104,583 GFF3902 GFF3903 - Similar to citrate lyase beta chain, 10, at 104,580 to 105,581 GFF3903 GFF3904 - Probable signal peptide protein, at 105,616 to 106,188 GFF3904
Group Condition GFF3900 GFF3901 GFF3902 GFF3903 GFF3904
complex community Community=Locust bean gum; Passage=4 -0.7 N.D. -0.2 -0.2 -5.2
complex community Community=guar; Passage=4 -0.6 N.D. -0.3 -0.2 -2.0
complex community Community=Locust bean gum; Passage=4 -1.0 N.D. -0.5 -1.1 -0.2
complex community Community=guar; Passage=4 -0.1 N.D. -0.5 -0.3 -1.4
complex community Community=Kojac gum; Passage=4 +0.3 N.D. +0.2 -0.2 -1.8
vitamin M9 with calcium pantothenate 10 mg/mL -0.4 N.D. -0.2 -0.2 -0.6
vitamin M9 with Supernatant from Cyptococcus -0.7 N.D. -0.3 -0.1 -0.2
complex community Community=arabino-guar; Passage=4 -0.9 N.D. -0.6 +0.1 +0.0
complex community Community=guar; Passage=4 -0.7 N.D. +0.1 +0.0 -0.9
phage phage_bap4 +0.2 N.D. -0.2 -0.6 -0.8
complex community Community=arabino-guar; Passage=4 -0.0 N.D. -0.3 +0.7 -1.5
vitamin M9 with Supernatant from Cyptococcus -0.6 N.D. -0.2 +0.1 -0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 N.D. -0.3 -0.2 -0.5
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.2 N.D. -0.2 -0.1 -0.5
phage phage_bap4 -0.1 N.D. -0.2 -0.6 -0.0
vitamin M9 with Supernatant from Cyptococcus -1.1 N.D. -0.2 +0.2 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.4 N.D. -0.2 -0.1 -0.2
complex community Community=arabino-guar; Passage=4 -0.4 N.D. -0.0 -0.4 -0.0
vitamin M9 with Supernatant from Cyptococcus -1.2 N.D. -0.1 +0.2 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 N.D. -0.1 -0.4 -0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 N.D. -0.2 -0.2 -0.4
complex community Community=guar; Passage=4 -0.5 N.D. -0.1 -0.3 +0.4
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.2 N.D. -0.3 +0.0 -0.3
complex community Community=Locust bean gum; Passage=4 -0.3 N.D. -0.4 -0.1 +0.5
vitamin M9 with Supernatant from Cyptococcus -0.8 N.D. +0.1 -0.1 +0.5
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.1 N.D. -0.3 -0.1 +0.5
phage phage_bap4 +0.4 N.D. -0.3 -0.4 +0.4
complex community Community=Locust bean gum; Passage=4 -0.0 N.D. -0.5 -0.8 +1.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.2 N.D. -0.1 +0.2 +0.4
phage phage_bap4 +0.1 N.D. +0.1 +0.2 +0.6
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