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Cofit
Protein
Homologs
Fitness for 5 genes in
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF3898 and GFF3899 are separated by 0 nucleotides
GFF3899 and GFF3900 are separated by 108 nucleotides
GFF3900 and GFF3901 overlap by 14 nucleotides
GFF3901 and GFF3902 are separated by 71 nucleotides
GFF3898 - O-antigen flippase Wzx, at 177,554 to 178,615
GFF3898
GFF3899 - O antigen biosynthesis rhamnosyltransferase rfbN (EC 2.4.1.-), at 178,616 to 179,560
GFF3899
GFF3900 - Mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22) / Mannose-6-phosphate isomerase (EC 5.3.1.8), at 179,669 to 181,000
GFF3900
GFF3901 - Phosphomannomutase (EC 5.4.2.8), at 180,987 to 182,420
GFF3901
GFF3902 - Undecaprenyl-phosphate galactosephosphotransferase (EC 2.7.8.6), at 182,492 to 183,922
GFF3902
Group
Condition
GFF3898
GFF3899
GFF3900
GFF3901
GFF3902
micoeukaryotes
C.elegans, mixed culture-1
N.D.
N.D.
N.D.
-7.2
N.D.
micoeukaryotes
C.elegans, mixed culture-2
N.D.
N.D.
N.D.
-7.0
N.D.
lb_plus_sm_buffer
LB_plus_SM_buffer
N.D.
N.D.
N.D.
-7.0
N.D.
phage
LB_plus_SM_buffer with FelixO1_phage (wt new) 0.0075 MOI
N.D.
N.D.
N.D.
-7.0
N.D.
phage
LB_plus_SM_buffer with FelixO1_phage (wt new) 0.075 MOI
N.D.
N.D.
N.D.
-7.0
N.D.
phage
LB_plus_SM_buffer with FelixO1_phage (wt new) 0.75 MOI
N.D.
N.D.
N.D.
-6.8
N.D.
phage
LB_plus_SM_buffer with EIP16_phage 8.75 MOI
N.D.
N.D.
N.D.
-6.8
N.D.
phage
LB_plus_SM_buffer with FelixO1_phage 0.05 MOI
N.D.
N.D.
N.D.
-6.4
N.D.
micoeukaryotes
Dictyostellum sp.mixed culture-1
N.D.
N.D.
N.D.
-6.0
N.D.
phage
LB_plus_SM_buffer with FelixO1_phage 0.5 MOI
N.D.
N.D.
N.D.
-5.2
N.D.
micoeukaryotes
Acanthamoeba sp., muxed culture-1
N.D.
N.D.
N.D.
-5.2
N.D.
lb_plus_sm_buffer
LB_plus_SM_buffer
N.D.
N.D.
N.D.
-5.2
N.D.
phage
LB_plus_SM_buffer with 6H2_phage 0.5 MOI
N.D.
N.D.
N.D.
-5.1
N.D.
micoeukaryotes
Acanthamoeba sp., muxed culture-2
N.D.
N.D.
N.D.
-4.3
N.D.
phage
LB_plus_SM_buffer with 6C2_phage 0.25 MOI
N.D.
N.D.
N.D.
-4.1
N.D.
micoeukaryotes
Dictyostellum sp.mixed culture-2
N.D.
N.D.
N.D.
-3.8
N.D.
phage
LB_plus_SM_buffer with EIP16_phage 0.0875 MOI
N.D.
N.D.
N.D.
-3.4
N.D.
phage
LB_plus_SM_buffer with Ffm_phage 0.001875 MOI
N.D.
N.D.
N.D.
-2.9
N.D.
phage
6F2_phage 15 MOI
N.D.
N.D.
N.D.
+3.0
N.D.
phage
LB_plus_SM_buffer with Br60_phage 0.0000005 MOI
N.D.
N.D.
N.D.
+3.0
N.D.
phage
LB_plus_SM_buffer with 6D2_phage 15 MOI
N.D.
N.D.
N.D.
+3.3
N.D.
phage
LB_plus_SM_buffer with 6F2_phage 15 MOI
N.D.
N.D.
N.D.
+3.5
N.D.
phage
LB_plus_SM_buffer with Br60_phage 0.000005 MOI
N.D.
N.D.
N.D.
+3.6
N.D.
phage
LB_plus_SM_buffer with 6F2_phage 15 MOI
N.D.
N.D.
N.D.
+3.7
N.D.
phage
LB_plus_SM_buffer with 6F2_phage 15 MOI
N.D.
N.D.
N.D.
+3.8
N.D.
phage
LB_plus_SM_buffer with 8C2_phage 15 MOI
N.D.
N.D.
N.D.
+3.9
N.D.
phage
LB_plus_SM_buffer with 8C2_phage 15 MOI
N.D.
N.D.
N.D.
+4.5
N.D.
phage
LB_plus_SM_buffer with ES18h1_phage 0.75 MOI
N.D.
N.D.
N.D.
+5.2
N.D.
phage
LB_plus_SM_buffer with Br60_phage 0.0005 MOI
N.D.
N.D.
N.D.
+7.2
N.D.
phage
LB_plus_SM_buffer with P22_phage 15 MOI
N.D.
N.D.
N.D.
+7.4
N.D.
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