Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_01975	PS417_01980	PS417_01985	PS417_01990	PS417_01995
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.8	N.D.	N.D.	-2.9	-5.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-2.2	N.D.	N.D.	-6.7	+0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.8	N.D.	N.D.	-3.1	-0.9
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.5	N.D.	N.D.	-3.5	-0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.0	N.D.	N.D.	-2.7	-0.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.5	N.D.	N.D.	-4.6	+0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.2	N.D.	N.D.	-1.7	-2.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.5	N.D.	N.D.	-2.7	-0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.7	N.D.	N.D.	-3.1	-0.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.1	N.D.	N.D.	-1.5	-1.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.1	N.D.	N.D.	-2.5	+0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.5	N.D.	N.D.	-0.9	-1.8
soil	soil sample 7; outgrowth in LB	-0.2	N.D.	N.D.	-0.6	-2.4
motility	outer cut, LB soft agar motility assay	-0.2	N.D.	N.D.	-2.5	-0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.3	N.D.	N.D.	-3.0	+0.4
carbon source	L-Valine (C)	-0.0	N.D.	N.D.	-1.0	-1.6
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.5	N.D.	N.D.	-1.0	-1.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.0	N.D.	N.D.	-1.5	-0.0
soil	soil sample 3; outgrowth in LB	-0.7	N.D.	N.D.	-1.6	-0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.9	N.D.	N.D.	-2.0	+0.5
carbon source	L-Arabinose (C)	-0.3	N.D.	N.D.	-0.0	-2.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.4	N.D.	N.D.	-1.2	-0.6
rhizosphere	rhizosphere sample 2; outgrowth in LB	-0.1	N.D.	N.D.	+0.4	-2.2
motility	outer cut, LB soft agar motility assay	-0.1	N.D.	N.D.	-1.9	+0.3
motility	outer cut, LB soft agar motility assay	-0.2	N.D.	N.D.	-1.7	+0.4
seeds	Growth on radish seeds for 24 hours	+0.4	N.D.	N.D.	-0.5	-1.3
motility	outer cut, LB soft agar motility assay	-0.2	N.D.	N.D.	-1.6	+0.6
phage	JP1 MOI 1	+0.4	N.D.	N.D.	+1.2	+0.7
carbon source	Gly-Glu (C)	+0.0	N.D.	N.D.	+0.4	+2.0
carbon source	Gly-Glu (C)	+0.1	N.D.	N.D.	+0.6	+2.5