Fitness for 5 genes in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

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500 ntGFF3884 and GFF3885 are separated by 10 nucleotidesGFF3885 and GFF3886 are separated by 177 nucleotidesGFF3886 and GFF3887 are separated by 376 nucleotidesGFF3887 and GFF3888 overlap by 1 nucleotides GFF3884 - Colanic acid biosynthesis glycosyl transferase WcaL, at 162,191 to 163,411 GFF3884 GFF3885 - Colanic acid biosynthesis protein wcaM, at 163,422 to 164,825 GFF3885 GFF3886 - UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9), at 165,003 to 165,896 GFF3886 GFF3887 - dTDP-glucose 4,6-dehydratase (EC 4.2.1.46), at 166,273 to 167,358 GFF3887 GFF3888 - dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133), at 167,358 to 168,257 GFF3888
Group Condition GFF3884 GFF3885 GFF3886 GFF3887 GFF3888
phage LB_plus_SM_buffer with FelixO1_phage (wt new) 0.075 MOI +0.8 +0.6 -6.9 -6.9 -5.0
phage LB_plus_SM_buffer with FelixO1_phage (wt new) 0.0075 MOI +0.6 +0.3 -4.8 -6.6 -6.8
phage LB_plus_SM_buffer with FelixO1_phage (wt new) 0.75 MOI +1.2 +0.6 -7.3 -6.7 -4.8
phage LB_plus_SM_buffer with FelixO1_phage 0.05 MOI +1.3 +0.5 -6.2 -5.6 -4.7
phage LB_plus_SM_buffer with 6H2_phage 0.5 MOI -0.0 +0.1 -0.9 -4.1 -5.6
phage LB_plus_SM_buffer with FelixO1_phage 0.5 MOI +2.4 +1.0 -5.7 -4.5 -3.6
micoeukaryotes Dictyostellum sp.mixed culture-1 -0.3 -0.1 -0.2 -3.1 -6.8
micoeukaryotes Dictyostellum sp.mixed culture-2 -0.0 -0.2 -0.2 -3.6 -6.5
lb_plus_sm_buffer LB_plus_SM_buffer +0.2 -0.2 -0.7 -3.5 -6.0
micoeukaryotes C.elegans, mixed culture-2 -0.0 -0.0 -0.1 -3.1 -6.4
micoeukaryotes Acanthamoeba sp., muxed culture-2 -0.2 -0.2 -0.2 -2.9 -6.2
micoeukaryotes C.elegans, mixed culture-1 -0.0 -0.1 -0.2 -3.0 -5.2
phage LB_plus_SM_buffer with EIP16_phage 8.75 MOI +0.8 +0.5 -4.3 -4.1 -0.8
lb_plus_sm_buffer LB_plus_SM_buffer -0.2 +0.1 -0.4 -4.2 -2.9
micoeukaryotes Acanthamoeba sp., muxed culture-1 -0.1 -0.1 -0.4 -3.3 -3.3
phage Ffm_phage 10 MOI; agar plate assay -0.2 -0.4 +0.4 -0.0 -6.5
phage LB_plus_SM_buffer with 6C2_phage 0.25 MOI +0.2 +0.2 -1.3 -2.6 -2.2
phage LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI +1.1 +0.5 -2.3 -2.4 -2.5
phage LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI +0.7 +0.4 -1.8 -1.9 -1.8
phage LB_plus_SM_buffer with EIP16_phage 0.875 MOI +0.3 +0.5 -2.4 -2.7 +0.2
phage LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI +1.2 +0.4 -2.4 -1.4 -1.3
phage 6F2_phage 15 MOI -0.4 -0.2 -0.1 +1.3 +5.0
phage 6F2_phage 15 MOI +0.1 -0.5 -0.2 +1.3 +5.2
phage LB_plus_SM_buffer with 6F2_phage 15 MOI +0.3 +0.2 -0.3 +1.5 +4.9
phage LB_plus_SM_buffer with 6F2_phage 15 MOI +0.3 +0.1 -0.2 +1.5 +5.0
phage LB_plus_SM_buffer with 6F2_phage 15 MOI +0.5 +0.3 -0.2 +1.5 +5.2
phage LB_plus_SM_buffer with 8C2_phage 15 MOI +0.1 -0.0 +0.1 +2.6 +8.1
phage LB_plus_SM_buffer with 8C2_phage 15 MOI +0.0 +0.4 +0.2 +3.0 +8.9
phage LB_plus_SM_buffer with P22_phage 15 MOI +0.1 +0.3 -0.1 +4.4 +8.7
phage LB_plus_SM_buffer with ES18h1_phage 0.75 MOI -0.7 -0.2 +0.7 +5.0 +9.7
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