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Cofit
Protein
Homologs
Fitness for 5 genes in
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF3878 and GFF3879 are separated by 2 nucleotides
GFF3879 and GFF3880 are separated by 110 nucleotides
GFF3880 and GFF3881 are separated by 53 nucleotides
GFF3881 and GFF3882 are separated by 99 nucleotides
GFF3878 - Colanic acid biosysnthesis glycosyl transferase WcaI, at 153,690 to 154,913
GFF3878
GFF3879 - Mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22) / Mannose-6-phosphate isomerase (EC 5.3.1.8), at 154,916 to 156,352
GFF3879
GFF3880 - Phosphomannomutase (EC 5.4.2.8), at 156,463 to 157,833
GFF3880
GFF3881 - Colanic acid biosynthsis UDP-glucose lipid carrier transferase WcaJ, at 157,887 to 159,281
GFF3881
GFF3882 - Lipopolysaccharide biosynthesis protein WzxC, at 159,381 to 160,892
GFF3882
Group
Condition
GFF3878
GFF3879
GFF3880
GFF3881
GFF3882
phage
LB_plus_SM_buffer with P22_phage 15 MOI
-0.5
-0.5
-0.0
-0.8
-0.3
phage
LB_plus_SM_buffer with ES18h1_phage 0.00075 MOI
-0.6
-0.3
+0.1
-0.7
-0.4
phage
LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI
-0.4
-0.2
-0.1
-0.5
-0.1
phage
LB_plus_SM_buffer with S16_phage 15 MOI
-0.2
+0.1
-0.4
-0.3
-0.3
phage
LB_plus_SM_buffer with S16_phage 15 MOI
-0.1
+0.2
-0.3
-0.6
-0.1
phage
LB_plus_SM_buffer with 6F2_phage 15 MOI
+0.0
-0.3
+0.1
-0.6
-0.2
phage
6F2_phage 15 MOI
-0.2
+0.2
-0.2
-0.6
-0.1
phage
LB_plus_SM_buffer with ES18h1_phage 0.75 MOI
+0.3
-0.6
-0.2
-0.4
+0.2
phage
LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI
+0.2
+0.3
+0.2
-0.7
-0.6
phage
LB_plus_SM_buffer with FelixO1_phage (wt new) 0.75 MOI
-0.1
+1.1
-0.5
-0.7
-0.3
phage
LB_plus_SM_buffer with 6D2_phage 15 MOI
+0.3
+0.0
+0.1
-0.6
-0.2
phage
LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI
+0.4
+0.3
+0.2
-0.6
-0.5
phage
phi19h1_phage 15 MOI
-0.3
+0.4
-0.1
-0.3
+0.2
phage
LB_plus_SM_buffer with 6F2_phage 15 MOI
+0.3
-0.3
+0.2
-0.4
-0.1
phage
LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI
+0.4
+0.0
+0.4
-0.5
-0.5
phage
LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI
+0.5
+0.3
-0.0
-0.4
-0.5
phage
LB_plus_SM_buffer with 8C2_phage 15 MOI
-0.2
+0.4
+0.2
-0.3
-0.1
phage
LB_plus_SM_buffer with FelixO1_phage (wt new) 0.0075 MOI
+0.2
+0.5
-0.4
-0.3
-0.1
phage
6F2_phage 15 MOI
-0.4
-0.1
+0.5
+0.3
-0.1
lb_plus_sm_buffer
LB_plus_SM_buffer
+0.7
+0.1
-0.1
-0.4
+0.0
phage
LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI
+0.6
+0.4
+0.0
-0.5
-0.3
phage
LB_plus_SM_buffer with 6F2_phage 15 MOI
+0.6
+0.2
+0.1
-0.4
-0.1
phage
LB_plus_SM_buffer with EIP16_phage 0.875 MOI
+0.6
+0.6
+0.2
-0.5
-0.3
phage
LB_plus_SM_buffer with 6D2_phage 15 MOI
+0.5
+0.2
+0.2
-0.4
+0.1
phage
LB_plus_SM_buffer with EIP16_phage 8.75 MOI
+0.6
+0.5
+0.0
-0.1
-0.3
phage
LB_plus_SM_buffer with FelixO1_phage (wt new) 0.075 MOI
+0.6
+0.8
-0.3
-0.2
-0.2
phage
LB_plus_SM_buffer with FelixO1_phage 0.05 MOI
+0.5
+0.7
-0.3
+0.4
-0.3
phage
LB_plus_SM_buffer with FelixO1_phage 0.5 MOI
+0.3
+1.0
-0.0
+0.2
-0.5
phage
LB_plus_SM_buffer with EIP16_phage 0.0875 MOI
+0.9
+0.6
-0.0
-0.2
+0.2
phage
LB_plus_SM_buffer with Br60_phage 0.0005 MOI
+2.4
-0.0
+0.2
+0.0
+0.0
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