Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF3866 and GFF3867 are separated by 522 nucleotidesGFF3867 and GFF3868 are separated by 7 nucleotidesGFF3868 and GFF3869 are separated by 34 nucleotidesGFF3869 and GFF3870 are separated by 17 nucleotides GFF3866 - HtrA protease/chaperone protein, at 63,301 to 64,782 GFF3866 GFF3867 - Translation elongation factor LepA, at 65,305 to 67,116 GFF3867 GFF3868 - Signal peptidase I (EC 3.4.21.89), at 67,124 to 68,089 GFF3868 GFF3869 - Putative transmembrane protein, at 68,124 to 68,492 GFF3869 GFF3870 - Ribonuclease III (EC 3.1.26.3), at 68,510 to 69,196 GFF3870
Group Condition GFF3866 GFF3867 GFF3868 GFF3869 GFF3870
complex community Community=arabino-guar; Passage=4 -0.0 -1.8 N.D. -1.5 -2.1
complex community Community=arabino-guar; Passage=4 -0.1 -1.4 N.D. -0.4 -2.4
complex community Community=guar; Passage=4 -0.1 -1.0 N.D. -0.6 -2.6
complex community Community=arabino-guar; Passage=4 -0.1 -1.3 N.D. -0.8 -1.7
complex community Community=guar; Passage=4 -0.3 -1.4 N.D. -0.3 -1.8
complex community Community=arabino-guar; Passage=4 -0.0 -1.5 N.D. -0.4 -1.8
complex community Community=guar; Passage=4 +0.2 -0.9 N.D. -0.1 -2.6
complex community Community=guar; Passage=4 -0.0 -1.4 N.D. -0.4 -1.5
complex community Community=Kojac gum; Passage=4 -0.2 -0.8 N.D. +0.1 -2.2
complex community Community=Locust bean gum; Passage=4 +0.0 -1.1 N.D. +0.2 -2.2
complex community Community=Locust bean gum; Passage=4 -0.0 -0.9 N.D. +0.3 -2.3
complex community Community=Locust bean gum; Passage=4 +0.1 -0.6 N.D. +0.8 -2.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.2 -0.1 N.D. -0.2 -1.4
no phage control no phage control -0.1 -0.3 N.D. -0.2 -1.1
no phage control no phage control -0.1 -0.3 N.D. -0.1 -1.3
no phage control no phage control -0.0 -0.3 N.D. -0.3 -1.1
complex community Community=Locust bean gum; Passage=4 +0.3 -0.8 N.D. +0.9 -2.1
no phage control no phage control -0.1 -0.3 N.D. -0.1 -1.0
phage phage_bap4 -0.0 -0.2 N.D. -0.6 -0.6
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.0 -0.1 N.D. -0.3 -1.0
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.1 -0.1 N.D. +0.2 -1.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.3 +0.3 N.D. -0.2 -0.8
vitamin M9 with Supernatant from Cyptococcus +0.0 -0.1 N.D. +0.3 -1.1
vitamin M9 with Supernatant from Cyptococcus -0.2 -0.1 N.D. +0.3 -0.8
vitamin M9 with calcium pantothenate 10 mg/mL -0.2 +0.1 N.D. +0.3 -0.8
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 -0.1 N.D. +0.5 -0.7
phage phage_bap4 -0.0 -0.1 N.D. +0.7 -1.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.2 +0.2 N.D. +0.3 -0.7
phage phage_bap4 -0.1 -0.2 N.D. +0.7 -0.7
phage phage_bap4 -0.1 -0.2 N.D. +0.6 -0.5
remove
GFF3866
plot		 remove
GFF3867
plot		 remove
GFF3868		 remove
GFF3869
plot		 remove
GFF3870
plot