Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF3863 and GFF3864 are separated by 17 nucleotidesGFF3864 and GFF3865 are separated by 174 nucleotidesGFF3865 and GFF3866 are separated by 109 nucleotidesGFF3866 and GFF3867 are separated by 522 nucleotides GFF3863 - RNA polymerase sigma factor RpoE, at 60,703 to 61,380 GFF3863 GFF3864 - Sigma factor RpoE negative regulatory protein RseA, at 61,398 to 62,075 GFF3864 GFF3865 - Sigma factor RpoE negative regulatory protein RseB precursor, at 62,250 to 63,191 GFF3865 GFF3866 - HtrA protease/chaperone protein, at 63,301 to 64,782 GFF3866 GFF3867 - Translation elongation factor LepA, at 65,305 to 67,116 GFF3867
Group Condition GFF3863 GFF3864 GFF3865 GFF3866 GFF3867
complex community Community=arabino-guar; Passage=4 +0.1 -0.6 -2.5 -0.0 -1.5
complex community Community=Locust bean gum; Passage=4 -0.2 -2.4 -0.2 -0.0 -0.9
complex community Community=Kojac gum; Passage=4 -0.1 -1.5 -1.1 -0.2 -0.8
complex community Community=arabino-guar; Passage=4 -0.0 -0.6 -1.2 -0.0 -1.8
complex community Community=guar; Passage=4 +0.1 -0.4 -1.4 -0.3 -1.4
complex community Community=arabino-guar; Passage=4 -0.4 -1.3 -0.0 -0.1 -1.4
complex community Community=arabino-guar; Passage=4 +0.2 -1.0 -0.7 -0.1 -1.3
complex community Community=guar; Passage=4 +0.1 -1.2 -0.1 -0.0 -1.4
complex community Community=Locust bean gum; Passage=4 -0.0 -0.8 -0.3 +0.0 -1.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 -0.6 -0.8 -0.2 -0.1
phage phage_bap4 +0.1 -0.5 -0.8 -0.0 -0.2
complex community Community=guar; Passage=4 +0.2 -0.1 -0.9 +0.2 -0.9
complex community Community=guar; Passage=4 -0.0 +0.0 -0.5 -0.1 -1.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 -0.4 -0.8 -0.2 -0.2
phage phage_bap4 +0.0 -0.8 -0.3 -0.1 -0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.2 -0.5 -0.5 -0.1 -0.1
phage phage_bap4 -0.4 -0.2 -0.5 -0.1 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.2 -0.3 -0.8 -0.2 +0.2
phage phage_bap4 -0.2 -0.6 -0.2 -0.1 -0.2
no phage control no phage control +0.1 -0.5 -0.4 -0.1 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 -0.8 -0.4 -0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 -0.6 -0.4 -0.3 +0.2
no phage control no phage control +0.1 -0.6 -0.3 -0.1 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.2 -0.4 -0.5 -0.2 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.0 -0.6 -0.6 -0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 -0.7 -0.2 -0.1 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 -0.8 +0.1 -0.2 +0.3
complex community Community=Locust bean gum; Passage=4 -0.2 -0.5 +0.4 +0.1 -0.6
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.2 -0.6 +0.3 -0.0 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.0 -0.1 -0.6 -0.2 +0.3
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