Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF3848 and GFF3849 are separated by 21 nucleotidesGFF3849 and GFF3850 are separated by 1 nucleotidesGFF3850 and GFF3851 are separated by 4 nucleotidesGFF3851 and GFF3852 are separated by 2 nucleotides GFF3848 - Similar to phosphoglycolate phosphatase, clustered with ribosomal large subunit pseudouridine synthase C, at 49,039 to 49,710 GFF3848 GFF3849 - Iron-sulfur cluster-binding protein, Rieske family, at 49,732 to 50,100 GFF3849 GFF3850 - Periplasmic serine proteases (ClpP class), at 50,102 to 51,118 GFF3850 GFF3851 - Uncharacterized MFS-type transporter, at 51,123 to 52,274 GFF3851 GFF3852 - Tetrapyrrole methylase family protein, at 52,277 to 53,038 GFF3852
Group Condition GFF3848 GFF3849 GFF3850 GFF3851 GFF3852
phage phage_bap4 -0.2 -0.6 -0.1 -0.2 -0.4
phage phage_bap4 -0.2 -0.5 -0.1 -0.2 -0.4
phage phage_bap4 -0.2 -0.5 -0.0 -0.2 -0.2
phage phage_bap4 -0.2 -0.4 -0.2 -0.2 -0.1
vitamin M9 with Supernatant from Cyptococcus -0.0 -0.6 -0.0 +0.0 -0.2
vitamin M9 with Supernatant from Cyptococcus -0.0 -0.4 +0.1 -0.1 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.4 -0.2 -0.0 -0.1 +0.0
complex community Community=arabino-guar; Passage=4 -0.5 -0.5 +0.2 -0.0 +0.3
vitamin M9 with Supernatant from Cyptococcus +0.1 -0.5 -0.0 -0.1 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 -0.3 -0.0 -0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL -0.2 +0.1 +0.0 -0.1 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL -0.3 +0.2 +0.0 -0.1 -0.1
complex community Community=guar; Passage=4 -0.4 -0.2 +0.2 +0.1 +0.1
complex community Community=Locust bean gum; Passage=4 -1.0 -0.3 +0.2 +0.0 +1.0
complex community Community=arabino-guar; Passage=4 -0.2 -0.5 +0.2 +0.2 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL -0.2 -0.1 +0.2 +0.0 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.2 +0.3 +0.0 -0.0 -0.1
complex community Community=Locust bean gum; Passage=4 -0.7 +0.3 +0.1 +0.1 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.0 +0.4 -0.2 -0.2 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 -0.1 +0.1 -0.1 +0.3
complex community Community=Locust bean gum; Passage=4 -0.6 -0.1 +0.2 +0.0 +0.7
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.2 +0.4 +0.1 -0.1 -0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.2 +0.3 +0.0 +0.0 +0.1
complex community Community=Kojac gum; Passage=4 -0.5 +0.7 +0.1 +0.3 -0.2
complex community Community=Locust bean gum; Passage=4 -0.7 +0.3 -0.0 +0.0 +0.7
complex community Community=arabino-guar; Passage=4 -0.2 +0.4 +0.1 +0.3 -0.2
complex community Community=guar; Passage=4 -0.2 +0.3 +0.2 +0.2 +0.0
complex community Community=guar; Passage=4 +0.2 +0.4 +0.1 +0.1 -0.0
complex community Community=arabino-guar; Passage=4 +0.0 -0.4 +0.3 +0.2 +0.6
complex community Community=guar; Passage=4 +0.2 -0.1 +0.2 +0.1 +0.4
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