Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF383 and GFF384 are separated by 14 nucleotidesGFF384 and GFF385 are separated by 0 nucleotidesGFF385 and GFF386 are separated by 38 nucleotidesGFF386 and GFF387 are separated by 30 nucleotides GFF383 - UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC 2.3.1.191), at 414,262 to 415,239 GFF383 GFF384 - Periplasmic chaperone of outer membrane proteins Skp @ Outer membrane protein H precursor, at 415,254 to 415,805 GFF384 GFF385 - Outer membrane protein assembly factor YaeT, at 415,806 to 418,241 GFF385 GFF386 - Membrane-associated zinc metalloprotease, at 418,280 to 419,650 GFF386 GFF387 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267), at 419,681 to 420,868 GFF387
Group Condition GFF383 GFF384 GFF385 GFF386 GFF387
complex community Community=guar; Passage=4 N.D. N.D. N.D. -0.3 N.D.
vitamin M9 with Supernatant from Cyptococcus N.D. N.D. N.D. -0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. N.D. N.D. -0.1 N.D.
complex community Community=guar; Passage=4 N.D. N.D. N.D. -0.1 N.D.
complex community Community=Locust bean gum; Passage=4 N.D. N.D. N.D. +0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. N.D. N.D. +0.1 N.D.
complex community Community=Locust bean gum; Passage=4 N.D. N.D. N.D. +0.1 N.D.
complex community Community=Locust bean gum; Passage=4 N.D. N.D. N.D. +0.1 N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. N.D. N.D. +0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. N.D. N.D. +0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL N.D. N.D. N.D. +0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. N.D. N.D. +0.1 N.D.
complex community Community=Locust bean gum; Passage=1 N.D. N.D. N.D. +0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. N.D. N.D. +0.1 N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. N.D. N.D. +0.1 N.D.
no phage control no phage control N.D. N.D. N.D. +0.1 N.D.
complex community Community=arabino-guar; Passage=4 N.D. N.D. N.D. +0.1 N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. N.D. N.D. +0.1 N.D.
complex community Community=Kojac gum; Passage=1 N.D. N.D. N.D. +0.1 N.D.
phage phage_bap4 N.D. N.D. N.D. +0.1 N.D.
no phage control no phage control N.D. N.D. N.D. +0.1 N.D.
no phage control no phage control N.D. N.D. N.D. +0.2 N.D.
phage phage_bap4 N.D. N.D. N.D. +0.2 N.D.
phage phage_bap4 N.D. N.D. N.D. +0.2 N.D.
phage phage_bap4 N.D. N.D. N.D. +0.2 N.D.
phage phage_bap4 N.D. N.D. N.D. +0.2 N.D.
phage phage_bap4 N.D. N.D. N.D. +0.2 N.D.
phage phage_bap4 N.D. N.D. N.D. +0.2 N.D.
phage phage_bap4 N.D. N.D. N.D. +0.3 N.D.
phage phage_bap4 N.D. N.D. N.D. +0.3 N.D.
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