Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF3839 and GFF3840 are separated by 16 nucleotidesGFF3840 and GFF3841 overlap by 4 nucleotidesGFF3841 and GFF3842 are separated by 7 nucleotidesGFF3842 and GFF3843 are separated by 6 nucleotides GFF3839 - Porphobilinogen deaminase (EC 2.5.1.61), at 37,525 to 38,418 GFF3839 GFF3840 - Uroporphyrinogen-III synthase (EC 4.2.1.75), at 38,435 to 39,205 GFF3840 GFF3841 - Uncharacterized protein EC-HemX, at 39,202 to 40,296 GFF3841 GFF3842 - Uncharacterized protein EC-HemY in Proteobacteria (unrelated to HemY-type PPO in GramPositives), at 40,304 to 41,587 GFF3842 GFF3843 - Uncharacterized MFS-type transporter, at 41,594 to 43,162 GFF3843
Group Condition GFF3839 GFF3840 GFF3841 GFF3842 GFF3843
complex community Community=arabino-guar; Passage=4 N.D. N.D. -0.6 -3.9 +0.1
complex community Community=guar; Passage=4 N.D. N.D. -0.4 -3.3 +0.1
complex community Community=arabino-guar; Passage=4 N.D. N.D. -1.6 -1.8 +0.2
complex community Community=arabino-guar; Passage=4 N.D. N.D. -1.4 -1.9 +0.3
complex community Community=Locust bean gum; Passage=4 N.D. N.D. -1.3 -1.4 +0.3
complex community Community=Kojac gum; Passage=4 N.D. N.D. -1.2 -1.1 +0.1
complex community Community=guar; Passage=4 N.D. N.D. -0.8 -1.6 +0.2
complex community Community=arabino-guar; Passage=4 N.D. N.D. -1.4 -0.9 +0.0
complex community Community=guar; Passage=4 N.D. N.D. -1.4 -0.8 +0.1
complex community Community=Locust bean gum; Passage=4 N.D. N.D. -1.1 -0.6 -0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. N.D. -1.0 -0.8 +0.0
vitamin M9 with Supernatant from Cyptococcus N.D. N.D. -1.2 -0.6 +0.1
vitamin M9 with Supernatant from Cyptococcus N.D. N.D. -1.2 -0.6 +0.1
complex community Community=Locust bean gum; Passage=4 N.D. N.D. -0.6 -1.1 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. N.D. -0.9 -0.7 +0.0
complex community Community=Kojac gum; Passage=1 N.D. N.D. -1.1 -0.3 -0.1
vitamin M9 with Supernatant from Cyptococcus N.D. N.D. -0.7 -0.7 -0.0
vitamin M9 with Supernatant from Cyptococcus N.D. N.D. -0.7 -0.6 -0.1
complex community Community=Locust bean gum; Passage=1 N.D. N.D. -1.0 -0.2 -0.1
vitamin M9 with Supernatant from Cyptococcus N.D. N.D. -0.8 -0.3 -0.0
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. N.D. -0.8 -0.3 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL N.D. N.D. -0.6 -0.3 +0.0
complex community Community=Locust bean gum; Passage=4 N.D. N.D. -0.6 -0.3 +0.1
phage phage_bap4 N.D. N.D. -0.5 -0.3 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. N.D. -0.7 -0.0 +0.1
phage phage_bap4 N.D. N.D. -0.4 +0.4 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. N.D. -0.4 +0.4 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. N.D. -0.4 +0.5 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. N.D. -0.3 +0.5 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. N.D. -0.1 +0.6 +0.1
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