Fitness for 5 genes in Hydrogenophaga sp. GW460-11-11-14-LB1

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500 ntGFF3838 and GFF3839 are separated by 246 nucleotidesGFF3839 and GFF3840 are separated by 12 nucleotidesGFF3840 and GFF3841 are separated by 55 nucleotidesGFF3841 and GFF3842 are separated by 46 nucleotides GFF3838 - Transcription repressor of multidrug efflux pump acrAB operon, TetR (AcrR) family, at 746,046 to 746,726 GFF3838 GFF3839 - RND efflux system, membrane fusion protein CmeA, at 746,973 to 748,160 GFF3839 GFF3840 - RND efflux system, inner membrane transporter CmeB, at 748,173 to 751,337 GFF3840 GFF3841 - RND efflux system, outer membrane lipoprotein CmeC, at 751,393 to 752,883 GFF3841 GFF3842 - FIG01199081: hypothetical protein, at 752,930 to 753,799 GFF3842
Group Condition GFF3838 GFF3839 GFF3840 GFF3841 GFF3842
carbon source Ying_Nucleobase14 rep A; time point 2 -0.7 +0.0 -0.0 -0.3 -1.4
carbon source Ying_Nucleobase14 rep B; time point 2 -0.4 -0.1 +0.0 -0.1 -1.3
carbon source Ying_sugar7 rep C; time point 3 -0.6 -0.3 -0.1 -0.5 -0.3
carbon source Ying_sugar7 rep A; time point 3 -0.4 -0.3 -0.2 -0.3 -0.2
carbon source Ying_sugar7 rep C; time point 2 -0.3 -0.2 -0.2 -0.2 -0.3
carbon source Ying_sugar7 rep B; time point 3 -0.7 -0.3 +0.0 -0.3 -0.1
carbon source Ying_AminoAcid20 rep C; time point 3 -1.5 +0.1 +0.2 -0.3 +0.3
carbon source Ying_Nucleobase14 rep C; time point 2 +0.2 -0.1 -0.1 -0.0 -1.2
carbon source Ying_AminoAcid20 rep B; time point 3 -1.3 -0.1 +0.1 -0.2 +0.4
carbon source Ying_OrganicAcid7 rep C; time point 3 -0.8 -0.1 +0.0 -0.4 +0.2
carbon source Ying_OrganicAcid7 rep B; time point 3 -0.8 -0.2 +0.2 -0.2 +0.0
carbon source Ying_Nucleobase14 rep B; time point 1 +0.5 -0.1 -0.0 -0.4 -0.8
carbon source Ying_Others16 rep C; time point 3 -0.8 -0.0 +0.1 +0.0 +0.0
carbon source Ying_sugar7 rep B; time point 2 +0.3 -0.3 -0.2 -0.3 -0.2
carbon source Ying_all64 rep A; time point 1 -0.6 -0.1 -0.1 +0.3 -0.1
carbon source Ying_all64 rep B; time point 3 -1.6 -0.1 +0.1 +0.6 +0.6
carbon source Ying_AminoAcid20 rep A; time point 3 -0.6 -0.1 -0.0 +0.0 +0.5
carbon source Ying_all64 rep A; time point 2 -0.6 +0.0 -0.1 +0.3 +0.5
carbon source Ying_Nucleobase14 rep A; time point 1 +1.4 -0.2 -0.0 -0.2 -0.9
carbon source Ying_sugar7 rep A; time point 1 +0.8 -0.3 -0.2 -0.1 -0.2
carbon source Ying_sugar7 rep B; time point 1 +1.0 -0.2 -0.1 -0.2 -0.1
carbon source Ying_Nucleobase14 rep C; time point 1 +1.0 +0.0 +0.0 +0.2 -0.7
carbon source Ying_OrganicAcid7 rep C; time point 1 +0.6 -0.2 +0.1 +0.3 -0.1
carbon source Ying_all64 rep A; time point 3 -0.9 +0.0 +0.1 +0.7 +0.8
carbon source Ying_OrganicAcid7 rep A; time point 1 +1.0 +0.0 +0.1 -0.3 -0.0
carbon source Ying_Others16 rep A; time point 1 +0.8 +0.1 +0.0 +0.0 -0.1
carbon source Ying_all64 rep B; time point 2 +0.2 -0.1 +0.1 +0.3 +0.5
carbon source Ying_Others16 rep A; time point 3 -0.7 -0.3 +0.3 -0.4 +3.9
carbon source Ying_all64 rep C; time point 3 +0.7 -0.2 -0.1 +0.6 +5.7
carbon source Ying_all64 rep C; time point 2 +1.6 -0.4 -0.0 +0.9 +5.3
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