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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF3836 and GFF3837 overlap by 4 nucleotides
GFF3837 and GFF3838 are separated by 166 nucleotides
GFF3838 and GFF3839 are separated by 115 nucleotides
GFF3839 and GFF3840 are separated by 16 nucleotides
GFF3836 - Cyclic beta-1,2-glucan synthase (EC 2.4.1.-), at 26,019 to 34,184
GFF3836
GFF3837 - no description, at 34,181 to 34,399
GFF3837
GFF3838 - Phosphoenolpyruvate carboxylase (EC 4.1.1.31), at 34,566 to 37,409
GFF3838
GFF3839 - Porphobilinogen deaminase (EC 2.5.1.61), at 37,525 to 38,418
GFF3839
GFF3840 - Uroporphyrinogen-III synthase (EC 4.2.1.75), at 38,435 to 39,205
GFF3840
Group
Condition
GFF3836
GFF3837
GFF3838
GFF3839
GFF3840
complex community
Community=Locust bean gum; Passage=4
-0.2
N.D.
-3.8
N.D.
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.0
N.D.
-3.8
N.D.
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.1
N.D.
-3.9
N.D.
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.0
N.D.
-3.8
N.D.
N.D.
complex community
Community=Kojac gum; Passage=4
-0.1
N.D.
-3.6
N.D.
N.D.
complex community
Community=Locust bean gum; Passage=4
-0.0
N.D.
-3.5
N.D.
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.1
N.D.
-3.4
N.D.
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.1
N.D.
-3.6
N.D.
N.D.
complex community
Community=Locust bean gum; Passage=4
+0.1
N.D.
-3.4
N.D.
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.0
N.D.
-3.3
N.D.
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.1
N.D.
-3.3
N.D.
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.0
N.D.
-3.3
N.D.
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.1
N.D.
-3.3
N.D.
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.1
N.D.
-3.1
N.D.
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.0
N.D.
-3.1
N.D.
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.0
N.D.
-3.1
N.D.
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.0
N.D.
-3.1
N.D.
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.0
N.D.
-3.0
N.D.
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.1
N.D.
-2.9
N.D.
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.1
N.D.
-2.9
N.D.
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.1
N.D.
-2.9
N.D.
N.D.
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-0.0
N.D.
-2.7
N.D.
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.1
N.D.
-2.9
N.D.
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.1
N.D.
-2.9
N.D.
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.0
N.D.
-2.7
N.D.
N.D.
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
+0.0
N.D.
-2.7
N.D.
N.D.
vitamin
M9 with Supernatant from Cyptococcus
+0.0
N.D.
-2.6
N.D.
N.D.
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
+0.0
N.D.
-2.5
N.D.
N.D.
vitamin
M9 with Supernatant from Cyptococcus
-0.0
N.D.
-2.4
N.D.
N.D.
vitamin
M9 with Supernatant from Cyptococcus
+0.1
N.D.
-2.5
N.D.
N.D.
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