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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF3833 and GFF3834 are separated by 168 nucleotides
GFF3834 and GFF3835 overlap by 4 nucleotides
GFF3835 and GFF3836 are separated by 64 nucleotides
GFF3836 and GFF3837 overlap by 4 nucleotides
GFF3833 - FIG01056426: hypothetical protein, at 23,586 to 24,842
GFF3833
GFF3834 - hypothetical protein, at 25,011 to 25,556
GFF3834
GFF3835 - ADP-ribosylglycohydrolase family protein, at 25,553 to 25,954
GFF3835
GFF3836 - Cyclic beta-1,2-glucan synthase (EC 2.4.1.-), at 26,019 to 34,184
GFF3836
GFF3837 - no description, at 34,181 to 34,399
GFF3837
Group
Condition
GFF3833
GFF3834
GFF3835
GFF3836
GFF3837
complex community
Community=Locust bean gum; Passage=4
-0.2
-0.1
-2.0
+0.1
N.D.
phage
phage_bap4
-0.0
-0.3
-1.5
+0.1
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.1
-0.7
-1.0
+0.1
N.D.
complex community
Community=arabino-guar; Passage=4
-0.2
-0.3
-1.1
+0.3
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.1
-0.3
-0.5
-0.1
N.D.
complex community
Community=arabino-guar; Passage=4
+0.4
-1.2
-0.1
+0.1
N.D.
phage
phage_bap4
-0.2
-0.7
+0.2
-0.1
N.D.
complex community
Community=Kojac gum; Passage=4
+0.2
-0.3
-0.6
-0.1
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.3
-0.4
-0.4
-0.1
N.D.
complex community
Community=arabino-guar; Passage=4
+0.3
-0.2
-0.9
+0.3
N.D.
complex community
Community=Locust bean gum; Passage=4
+0.3
+0.6
-1.2
-0.2
N.D.
complex community
Community=guar; Passage=4
+0.2
-1.1
+0.4
+0.1
N.D.
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
+0.2
-0.6
-0.1
+0.1
N.D.
phage
phage_bap4
-0.2
-0.2
+0.5
-0.1
N.D.
phage
phage_bap4
+0.0
-0.3
+0.4
-0.1
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.2
-0.1
+0.5
+0.0
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.1
-0.4
+0.7
+0.1
N.D.
complex community
Community=Kojac gum; Passage=1
+0.1
-0.2
+0.5
+0.0
N.D.
no phage control
no phage control
-0.2
+0.2
+0.4
+0.0
N.D.
phage
phage_bap4
-0.1
+0.3
+0.4
-0.2
N.D.
complex community
Community=Locust bean gum; Passage=1
+0.0
-0.3
+0.7
+0.1
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.2
-0.3
+0.6
+0.0
N.D.
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
+0.1
-0.2
+0.7
+0.0
N.D.
complex community
Community=arabino-guar; Passage=4
-0.0
-0.4
+1.0
-0.0
N.D.
phage
phage_bap4
-0.2
+0.0
+0.7
+0.0
N.D.
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
+0.0
+0.4
+0.3
-0.0
N.D.
complex community
Community=guar; Passage=4
+0.2
+0.1
+0.4
+0.1
N.D.
vitamin
M9 with Supernatant from Cyptococcus
+0.1
-0.2
+0.9
+0.1
N.D.
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
-0.1
+0.4
+1.0
-0.0
N.D.
complex community
Community=guar; Passage=4
+0.6
+0.6
+0.5
+0.0
N.D.
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