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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF3826 and GFF3827 are separated by 137 nucleotides
GFF3827 and GFF3828 are separated by 245 nucleotides
GFF3828 and GFF3829 are separated by 138 nucleotides
GFF3829 and GFF3830 overlap by 4 nucleotides
GFF3826 - hypothetical protein, at 3,866,557 to 3,866,874
GFF3826
GFF3827 - Ferredoxin--NADP(+) reductase (EC 1.18.1.2) @ Flavodoxin--NADP(+) reductase (EC 1.19.1.1), at 3,867,012 to 3,867,860
GFF3827
GFF3828 - hypothetical protein, at 3,868,106 to 3,869,941
GFF3828
GFF3829 - hypothetical protein, at 3,870,080 to 3,870,574
GFF3829
GFF3830 - hypothetical protein, at 3,870,571 to 3,870,918
GFF3830
Group
Condition
GFF3826
GFF3827
GFF3828
GFF3829
GFF3830
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.6
N.D.
-0.3
-0.4
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.5
N.D.
-0.2
+0.1
-0.6
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
N.D.
-0.2
-0.4
-0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
N.D.
-0.0
-0.0
-0.8
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
N.D.
-0.1
-0.2
-0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.2
N.D.
-0.1
-0.2
-0.5
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.3
N.D.
+0.0
-0.1
-0.6
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
N.D.
-0.1
-0.1
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
N.D.
-0.0
+0.0
-0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.2
N.D.
-0.2
-0.1
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.3
N.D.
-0.0
-0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.3
N.D.
+0.0
-0.2
-0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.2
N.D.
-0.1
-0.1
-0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
N.D.
-0.1
-0.1
-0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.2
N.D.
-0.0
+0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.2
N.D.
-0.1
+0.0
-0.4
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.2
N.D.
-0.0
-0.2
-0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
N.D.
+0.0
+0.2
-0.2
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