Fitness for 4 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF3810 and GFF3811 are separated by 7 nucleotidesGFF3811 and GFF3812 are separated by 114 nucleotidesGFF3812 and GFF3813 are separated by 10 nucleotides GFF3810 - Conserved membrane protein in copper uptake, YcnI / Copper metallochaperone PCu(A)C, inserts Cu(I) into cytochrome oxidase subunit II, at 311,080 to 311,991 GFF3810 GFF3811 - Cardiolipin synthase (EC 2.7.8.-) phosphatidylethanolamine-utilizing, bacterial type ClsC, at 311,999 to 313,723 GFF3811 GFF3812 - Bis-ABC ATPase Uup, at 313,838 to 315,742 GFF3812 GFF3813 - no description, at 315,753 to 315,923 GFF3813
Group Condition GFF3810 GFF3811 GFF3812 GFF3813
complex community Community=arabino-guar; Passage=4 -1.1 +0.1 -0.2 -0.4
complex community Community=guar; Passage=4 -0.0 -0.2 -0.2 -0.4
complex community Community=Locust bean gum; Passage=4 -0.2 +0.2 -0.1 -0.4
vitamin M9 with Supernatant from Cyptococcus -0.5 +0.1 -0.1 -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 -0.1 -0.1 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.2 -0.1 -0.1 -0.1
complex community Community=arabino-guar; Passage=4 -0.5 +0.2 +0.0 -0.2
vitamin M9 with Supernatant from Cyptococcus +0.0 -0.1 -0.2 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.3 -0.0 +0.0 -0.1
complex community Community=arabino-guar; Passage=4 -0.3 +0.1 -0.0 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.3 -0.0 +0.1 -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.2 +0.1 +0.1 -0.1
complex community Community=Locust bean gum; Passage=4 +0.3 +0.1 -0.2 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 -0.1 +0.0 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 +0.1 +0.1 -0.2
complex community Community=Kojac gum; Passage=4 +0.0 +0.3 -0.1 -0.3
complex community Community=guar; Passage=4 +0.2 +0.1 -0.2 -0.1
complex community Community=Locust bean gum; Passage=4 +0.3 +0.2 -0.2 -0.3
complex community Community=guar; Passage=4 +0.1 +0.3 -0.1 -0.1
complex community Community=guar; Passage=4 +0.6 -0.0 -0.1 -0.3
phage phage_bap4 +0.2 +0.1 +0.1 -0.1
no phage control no phage control +0.2 +0.1 +0.1 +0.0
phage phage_bap4 +0.4 +0.1 +0.0 -0.0
complex community Community=Locust bean gum; Passage=4 +0.5 +0.0 +0.1 -0.1
phage phage_bap4 +0.4 +0.1 +0.0 -0.0
phage phage_bap4 +0.2 +0.1 +0.2 +0.2
phage phage_bap4 +0.2 +0.1 +0.2 +0.2
complex community Community=arabino-guar; Passage=4 +0.6 +0.2 -0.0 -0.1
phage phage_bap4 +0.2 +0.1 +0.2 +0.3
phage phage_bap4 +0.4 +0.1 +0.2 +0.3
remove
GFF3810
plot		 remove
GFF3811
plot		 remove
GFF3812		 remove
GFF3813
plot